RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 C5orf51A6NDU8 294 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PPM1BO75688 479 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PROS1P07225 676 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 TFPTP0C1Z6 253 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 NDST2P52849 883 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CEBPGP53567 150 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 MBTD1Q05BQ5 628 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SMARCB1Q12824 385 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ELOAQ14241 798 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 NKX1-1Q15270 411 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 DPYSL2Q16555 572 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 C1QTNF12Q5T7M4 302 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 TSTD2Q5T7W7 516 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CLIP4Q8N3C7 705 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 COQ8AQ8NI60 647 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 DCPSQ96C86 337 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 FCRL5Q96RD9 977 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 WACQ9BTA9 647 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 MRIQ9BWK5 157 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 KCNH6Q9H252 994 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ADAM7Q9H2U9 754 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 WDR6Q9NNW5 1121 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF490Q9ULM2 529 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ZFR2Q9UPR6 939 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SLIT3O75094 1523 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SPEF2Q9C093 1822 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 F8W036 122 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 FAAHO00519 579 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SHOXO15266 292 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 KIAA0513O60268 411 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ACSL4O60488 711 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CDK1P06493 297 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CHRNA5P30532 468 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SSTR3P32745 418 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 RPL9P32969 192 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 AP1S1P61966 158 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PCLAFQ15004 111 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SPHARQ15513 63 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 LGI2Q8N0V4 545 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 LINGO1Q96FE5 620 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 FBXL20Q96IG2 436 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PCBD2Q9H0N5 130 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 QRSL1Q9H0R6 528 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 MFSD1Q9H3U5 465 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 DTLQ9NZJ0 730 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ZC3H13Q5T200 1668 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 H1F0P07305 194 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PPP3CBP16298 524 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 MAOAP21397 527 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CDH11P55287 796 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CEACAM7Q14002 265 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 METTL7BQ6UX53 244 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 GAREM2Q75VX8 874 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SSX6Q7RTT6 188 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 VN1R5Q7Z5H4 357 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CLDN22Q8N7P3 220 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CYP2W1Q8TAV3 490 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 NDNFQ8TB73 568 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 OSTF1Q92882 214 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 FCRL1Q96LA6 429 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PPP1R16BQ96T49 567 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 OMDQ99983 421 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 B3GNT5Q9BYG0 378 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 U3KQV3 271 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 A0A096LPI6 279 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 RBBP9O75884 186 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 URODP06132 367 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 TXNP10599 105 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CHRNB2P17787 502 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 FKBP1AP62942 108 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 GPR153Q6NV75 609 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 FAM183BPQ6ZVS7 135 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 LRRC70Q7Z2Q7 622 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 MUL1Q969V5 352 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 OR51J1Q9H342 316 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 MOCS1Q9NZB8 636 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 MGAT4CQ9UBM8 478 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 POLR1DQ9Y2S0 133 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PRELID3BQ9Y3B1 194 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 GABARAPO95166 117 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ADAP00813 363 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 LTKP29376 864 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 GRK5P34947 590 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 NR0B1P51843 470 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CASP7P55210 303 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 GPX6P59796 221 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 FGFBP1Q14512 234 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 FASTKD3Q14CZ7 662 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 HLFQ16534 295 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 DUOXA1Q1HG43 343 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 AADACL4Q5VUY2 407 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SYNPOQ8N3V7 929 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 OR1M1Q8NGA1 313 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 OR2L2Q8NH16 312 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 RHEBL1Q8TAI7 183 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ING5Q8WYH8 240 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 UPF1Q92900 1129 aaKnown RBP eCLIP6.94□□□□□ -1.37e-7■□□□□ 10.3
CNOT1-216ENST00000569240 COPS5Q92905 334 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 TBATAQ96M53 351 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PDCD2LQ9BRP1 358 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms