RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SMARCAL1Q9NZC9 954 aa8.21□□□□□ -1.1
SMG1-216ENST00000569122 LRFN1Q9P244 771 aa8.21□□□□□ -1.1
SMG1-216ENST00000569122 CTTNBP2NLQ9P2B4 639 aa8.21□□□□□ -1.1
SMG1-216ENST00000569122 RSPH14Q9UHP6 348 aa8.21□□□□□ -1.1
SMG1-216ENST00000569122 PLEKHA6Q9Y2H5 1048 aa8.21□□□□□ -1.1
SMG1-216ENST00000569122 KLHL20Q9Y2M5 609 aa8.21□□□□□ -1.1
SMG1-216ENST00000569122 NCOA6Q14686 2063 aaPredicted RBP8.21□□□□□ -1.1
SMG1-216ENST00000569122 JMJD1CQ15652 2540 aa8.21□□□□□ -1.1
SMG1-216ENST00000569122 TRBV5-4A0A0C4DH59 114 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 SLC5A10A0PJK1 596 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 HACD1B0YJ81 288 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 KLRC4-KLRK1H3BQV0 150 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 H7C0S8 307 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 TFECO14948 347 aaPredicted RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 ARHGEF9O43307 516 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 SLC25A12O75746 678 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 AGTP01019 485 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 RAF1P04049 648 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 C8BP07358 591 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 H2AFZP0C0S5 128 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 TPBGLP0DKB5 382 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 SKILP12757 684 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 MC4RP32245 332 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 KIR2DL3P43628 341 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 TAS2R40P59535 323 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 PPP2R2BQ00005 443 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 PMPCAQ10713 525 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 WASHC5Q12768 1159 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 KEAP1Q14145 624 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 BRD3Q15059 726 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 NFKBIBQ15653 356 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 NDUFA9Q16795 377 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 DEFB113Q30KQ7 82 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 SHEQ5VZ18 495 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 TMEM198Q66K66 360 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 ITPRIPL1Q6GPH6 555 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 ALKBH5Q6P6C2 394 aaKnown RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 UNC5DQ6UXZ4 953 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 RANBP10Q6VN20 620 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 Q71RC1 249 aaPredicted RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 H2AFVQ71UI9 128 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 PRIMA1Q86XR5 153 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 CLDN19Q8N6F1 224 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 LINC01555Q8NAE3 123 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 GSDMBQ8TAX9 411 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 MCOLN3Q8TDD5 553 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 ASZ1Q8WWH4 475 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 SYN2Q92777 582 aaPredicted RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 MMABQ96EY8 250 aaPredicted RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 OXNAD1Q96HP4 312 aaPredicted RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 CYTH2Q99418 400 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 ZFYVE21Q9BQ24 234 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 FAM96AQ9H5X1 160 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 ZNF395Q9H8N7 513 aaPredicted RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 MMP25Q9NPA2 562 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 ZNF358Q9NW07 568 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 DDX56Q9NY93 547 aaKnown RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 PLAGL1Q9UM63 463 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 KLF13Q9Y2Y9 288 aaPredicted RBP8.2□□□□□ -1.1
SMG1-216ENST00000569122 ANKRD12Q6UB98 2062 aa8.2□□□□□ -1.1
SMG1-216ENST00000569122 A0A0J9YVX5 310 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 A0A1B0GTH9 108 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 SOWAHDA6NJG2 315 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 C3orf70A6NLC5 250 aaPredicted RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 GABRR3A8MPY1 467 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 KIAA1324LA8MWY0 1029 aaPredicted RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 NME2P1O60361 137 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 CTSVO60911 334 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 NEURL1O76050 574 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 PKMP14618 531 aaKnown RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 NME2P22392 152 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 HOXC12P31275 282 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 PPARGP37231 505 aaPredicted RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 AVPR1BP47901 424 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 ZFP36L2P47974 494 aaKnown RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 CYB561P49447 251 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 ZNF140P52738 457 aaPredicted RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 DYNLT1P63172 113 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 HSF1Q00613 529 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 ACTN3Q08043 901 aaPredicted RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 PTK6Q13882 451 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 FAM53BQ14153 422 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 FASTKQ14296 549 aaKnown RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 PRTGQ2VWP7 1150 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 SLC25A35Q3KQZ1 300 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 LRRC38Q5VT99 294 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 FBXW10Q5XX13 1052 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 PAMR1Q6UXH9 720 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 NPNTQ6UXI9 565 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 PACS1Q6VY07 963 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 RNF44Q7L0R7 432 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 CRLF3Q8IUI8 442 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 CHERPQ8IWX8 916 aaKnown RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 ZNF567Q8N184 647 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 OR10Q1Q8NGQ4 319 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 OR13C4Q8NGS5 318 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 MAGEC3Q8TD91 643 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 CTNNBL1Q8WYA6 563 aaPredicted RBP8.19□□□□□ -1.1
SMG1-216ENST00000569122 P3H4Q92791 437 aa8.19□□□□□ -1.1
SMG1-216ENST00000569122 RERGQ96A58 199 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms