RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 SH3GL2Q99962 352 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 PLCD4Q9BRC7 762 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 HAUS8Q9BT25 410 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 DPH7Q9BTV6 452 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 CNOT10Q9H9A5 744 aaKnown RBP17.29■□□□□ 0.36
COMMD4-222ENST00000568034 SOHLH2Q9NX45 425 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 ANKMY1Q9P2S6 941 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 SLC17A7Q9P2U7 560 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 ACTL7BQ9Y614 415 aa17.29■□□□□ 0.36
COMMD4-222ENST00000568034 WDFY3Q8IZQ1 3526 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 B4E171 279 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 PLD2O14939 933 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 PRAMEF4O60810 478 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 CTSVO60911 334 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 CDH1P12830 882 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 TSPAN7P41732 249 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 CCDC153Q494R4 210 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 CATSPEREQ5SY80 951 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 PRAMEF9Q5VWM5 478 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 RNF44Q7L0R7 432 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 ABHD11Q8NFV4 315 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 SLC5A11Q8WWX8 675 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 ARL8AQ96BM9 186 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 PHF21BQ96EK2 531 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 TCTN2Q96GX1 697 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 PDE7BQ9NP56 450 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 SSU72Q9NP77 194 aaKnown RBP17.28■□□□□ 0.36
COMMD4-222ENST00000568034 DNAJC11Q9NVH1 559 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 PILRAQ9UKJ1 303 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 TMCO1Q9UM00 188 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 MSRB2Q9Y3D2 182 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 PCDHGA8Q9Y5G5 932 aa17.28■□□□□ 0.36
COMMD4-222ENST00000568034 K7EPI3 171 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 E2F3O00716 465 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 CCNT2O60583 730 aaKnown RBP17.27■□□□□ 0.36
COMMD4-222ENST00000568034 SMIM24O75264 130 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 RPS17P08708 135 aaKnown RBP17.27■□□□□ 0.36
COMMD4-222ENST00000568034 MSL3P1P0C860 447 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 ATP5F1P24539 256 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-222ENST00000568034 EEF1DP29692 281 aaKnown RBP17.27■□□□□ 0.36
COMMD4-222ENST00000568034 MLLT3P42568 568 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-222ENST00000568034 CSNK1G2P78368 415 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 SHC2P98077 582 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 FOXK2Q01167 660 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 MC2RQ01718 297 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 CDC16Q13042 620 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 GPR19Q15760 415 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 DEFB110Q30KQ9 67 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 ZYG11AQ6WRX3 759 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 FAM129CQ86XR2 697 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 TCP10LQ8TDR4 215 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 TMEM237Q96Q45 408 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 C1QTNF3Q9BXJ4 246 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 NRSN2Q9GZP1 204 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 SPNS1Q9H2V7 528 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 POLR1BQ9H9Y6 1135 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 APMAPQ9HDC9 416 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 GPRC5BQ9NZH0 403 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 AKAP7Q9P0M2 348 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-222ENST00000568034 PISDQ9UG56 409 aa17.27■□□□□ 0.36
COMMD4-222ENST00000568034 E7EQ34 232 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 H3BMH7 237 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 H7BY64 318 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 HAT1O14929 419 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 CTSBP07858 339 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 ETV4P43268 484 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 ARL4DP49703 201 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 PRKAA2P54646 552 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 GABREP78334 506 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 MPP2Q14168 576 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 NAA25Q14CX7 972 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 RTP5Q14D33 572 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 PDK4Q16654 411 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 AGBL2Q5U5Z8 902 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 FBXO42Q6P3S6 717 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 IGF2-ASQ6U949 168 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 SLCO4C1Q6ZQN7 724 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 TMPRSS11BQ86T26 416 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 ARMC2Q8NEN0 867 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 OR4K1Q8NGD4 311 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 ZNF501Q96CX3 271 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-222ENST00000568034 PRAP1Q96NZ9 151 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 FCRL4Q96PJ5 515 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 FAM111AQ96PZ2 611 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 OR6C1Q96RD1 312 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 FBXO8Q9NRD0 319 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 TMEM184CQ9NVA4 438 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 OPTCQ9UBM4 332 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 PCTPQ9UKL6 214 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 DYRK1BQ9Y463 629 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 TNPO3Q9Y5L0 923 aaKnown RBP17.26■□□□□ 0.35
COMMD4-222ENST00000568034 KCNE2Q9Y6J6 123 aa17.26■□□□□ 0.35
COMMD4-222ENST00000568034 C9orf172C9J069 976 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 PRPF4O43172 522 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■■■■■ 39.9
COMMD4-222ENST00000568034 JMJD7P0C870 316 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 SPTBP11277 2137 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 TAC1P20366 129 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 HRH2P25021 359 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 REEP5Q00765 189 aa17.25■□□□□ 0.35
COMMD4-222ENST00000568034 ACY1Q03154 408 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms