RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 AP1M2Q9Y6Q5 423 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
CMTM3-213ENST00000566756 LAMA2P24043 3122 aaKnown RBP16.28■□□□□ 0.2
CMTM3-213ENST00000566756 BCKDKO14874 412 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 SMAD6O43541 496 aaKnown RBP16.27■□□□□ 0.2
CMTM3-213ENST00000566756 ARHGDIAP52565 204 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 CDK5R2Q13319 367 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 CAPN13Q6MZZ7 669 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-213ENST00000566756 CES5AQ6NT32 575 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 CRTC3Q6UUV7 619 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 ZDHHC21Q8IVQ6 265 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 APCDD1Q8J025 514 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 ZNF707Q96C28 371 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-213ENST00000566756 ZNF347Q96SE7 839 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 COPS8Q99627 209 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 SMG9Q9H0W8 520 aaKnown RBP16.27■□□□□ 0.2
CMTM3-213ENST00000566756 IL1RAPQ9NPH3 570 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 TBC1D14Q9P2M4 693 aa16.27■□□□□ 0.2
CMTM3-213ENST00000566756 ZNF99A8MXY4 864 aaPredicted RBP16.27■□□□□ 0.19
CMTM3-213ENST00000566756 EVPLLA8MZ36 301 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 FOXD2O60548 495 aaPredicted RBP16.27■□□□□ 0.19
CMTM3-213ENST00000566756 DPM1O60762 260 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 SULT1C4O75897 302 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 OR56A5P0C7T3 313 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 SDC1P18827 310 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 IGFBP5P24593 272 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 C21orf58P58505 322 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 PHEXP78562 749 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 CPSF6Q16630 551 aaKnown RBP eCLIP16.27■□□□□ 0.19
CMTM3-213ENST00000566756 CPA6Q8N4T0 437 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 PAF1Q8N7H5 531 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 KIAA1958Q8N8K9 716 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 ZNF557Q8N988 423 aaPredicted RBP16.27■□□□□ 0.19
CMTM3-213ENST00000566756 GPR26Q8NDV2 337 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 NELL1Q92832 810 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 ITFG2Q969R8 447 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 ECHDC3Q96DC8 303 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 SCRN2Q96FV2 425 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 METTL2AQ96IZ6 378 aaKnown RBP16.27■□□□□ 0.19
CMTM3-213ENST00000566756 LMLNQ96KR4 655 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 LMAN2LQ9H0V9 348 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 RPS6KA6Q9UK32 745 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 ERGIC3Q9Y282 383 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 TPRKBQ9Y3C4 175 aa16.27■□□□□ 0.19
CMTM3-213ENST00000566756 PABPN1LA6NDY0 278 aaKnown RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 CFAP99D6REC4 459 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 RFXANKO14593 260 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 UGDHO60701 494 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 NDUFS2O75306 463 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 BCAS1O75363 584 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 GABARAPO95166 117 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 SEMG1P04279 462 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 HIST1H2AGP0C0S8 130 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 HIST1H2ADP20671 130 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 PRPS1L1P21108 318 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 AGXTP21549 392 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 ACVR2AP27037 513 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 AOAHP28039 575 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 HTR1BP28222 390 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 WEE1P30291 646 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 CD97P48960 835 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 AP1S2P56377 157 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 SRSF11Q05519 484 aaKnown RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 LMAN2Q12907 356 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 ZNF77Q15935 545 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 OR2T5Q6IEZ7 315 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 CRTC1Q6UUV9 634 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 NEK10Q6ZWH5 1172 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 UBE2R2Q712K3 238 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 GRASPQ7Z6J2 395 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 ADGRG2Q8IZP9 1017 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 PARP8Q8N3A8 854 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 SLC15A4Q8N697 577 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 OR2AP1Q8NGE2 309 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 OR6K2Q8NGY2 324 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 OR2T29Q8NH02 315 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 CLHC1Q8NHS4 586 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 ASB11Q8WXH4 323 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 OTUB2Q96DC9 234 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 VMP1Q96GC9 406 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 HIST1H2AHQ96KK5 128 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 MCCC1Q96RQ3 725 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 HIST1H2AJQ99878 128 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 INPP5KQ9BT40 448 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 H2AFJQ9BTM1 129 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 DUSP21Q9H596 190 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 WARS2Q9UGM6 360 aaKnown RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 PPT2Q9UMR5 302 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 YBX2Q9Y2T7 364 aaKnown RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 SLC22A1O15245 554 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 ZNF821O75541 412 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 UGT2B4P06133 528 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 CCR7P32248 378 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 KIR3DL1P43629 444 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 GP2P55259 537 aaKnown RBP16.26■□□□□ 0.19
CMTM3-213ENST00000566756 ZNF846Q147U1 533 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 CTF1Q16619 201 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 DUOXA1Q1HG43 343 aa16.26■□□□□ 0.19
CMTM3-213ENST00000566756 PLEKHG6Q3KR16 790 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms