RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 C19orf47Q8N9M1 422 aaKnown RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 SNX31Q8N9S9 440 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 OR2A1Q8NGT9 310 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 RDH11Q8TC12 318 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 TCP10LQ8TDR4 215 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ESAMQ96AP7 390 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ARL8AQ96BM9 186 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 TLCD1Q96CP7 247 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 PHF21BQ96EK2 531 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 PKNOX2Q96KN3 472 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ATP6V1G3Q96LB4 118 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 FAM111AQ96PZ2 611 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 SH3GL2Q99962 352 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 HAUS8Q9BT25 410 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 STRADBQ9C0K7 418 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 KLHL25Q9H0H3 589 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 C12orf65Q9H3J6 166 aaKnown RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 ALG2Q9H553 416 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ZNF768Q9H5H4 540 aaKnown RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 MRPS30Q9NP92 439 aaKnown RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 C1GALT1Q9NS00 363 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 DNAJC11Q9NVH1 559 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 INTS7Q9NVH2 962 aaKnown RBP11.05□□□□□ -0.64
KARS-207ENST00000566560 PDP2Q9P2J9 529 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 SLC17A7Q9P2U7 560 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 OPTCQ9UBM4 332 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 SH2B3Q9UQQ2 575 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 PLLPQ9Y342 182 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 DYRK1BQ9Y463 629 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 ASB1Q9Y576 335 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 KNTC1P50748 2209 aa11.05□□□□□ -0.64
KARS-207ENST00000566560 IGHV5-51A0A0C4DH38 117 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 FAM149AA5PLN7 773 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 SLC9B1P1A6NJY1 282 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 TARM1B6A8C7 271 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 TMX2-CTNND1H3BSU7 103 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 STX16-NPEPL1H3BU86 382 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 AGRPO00253 132 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 STX16O14662 325 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 HGSO14964 777 aaPredicted RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 ZBTB11O95625 1053 aaPredicted RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 JUPP14923 745 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 ATP5F1P24539 256 aaPredicted RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 EEF1DP29692 281 aaKnown RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 CSTF2P33240 577 aaKnown RBP eCLIP11.04□□□□□ -0.64
KARS-207ENST00000566560 GGT5P36269 586 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 ABATP80404 500 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 ZFP36L1Q07352 338 aaKnown RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 C16orf72Q14CZ0 275 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 PDK4Q16654 411 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 TTMPQ5BVD1 217 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 KIAA1614Q5VZ46 1190 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 DGLUCYQ7Z3D6 616 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 ADCK2Q7Z695 626 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 TMPRSS11BQ86T26 416 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 KMT5CQ86Y97 462 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 SLC22A9Q8IVM8 553 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 CHCHD4Q8N4Q1 142 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 SLC5A11Q8WWX8 675 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 LIN37Q96GY3 246 aaPredicted RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 CDK15Q96Q40 435 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 OR4K3Q96R72 315 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 SELENOSQ9BQE4 189 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 CD244Q9BZW8 370 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 SLC6A20Q9NP91 592 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 CUEDC1Q9NWM3 386 aaPredicted RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 AKAP7Q9P0M2 348 aaPredicted RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 SLC22A14Q9Y267 594 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 KLHL20Q9Y2M5 609 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 MAP4K5Q9Y4K4 846 aa11.04□□□□□ -0.64
KARS-207ENST00000566560 TNPO3Q9Y5L0 923 aaKnown RBP11.04□□□□□ -0.64
KARS-207ENST00000566560 LRRC14BA6NHZ5 514 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 HMGB1P1B2RPK0 211 aaPredicted RBP11.03□□□□□ -0.64
KARS-207ENST00000566560 G3V2L1 256 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 K7EPI3 171 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 TM9SF1O15321 606 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.64
KARS-207ENST00000566560 DLX3O60479 287 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 ZWINTO95229 277 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 SIX3O95343 332 aaPredicted RBP11.03□□□□□ -0.64
KARS-207ENST00000566560 RPS17P08708 135 aaKnown RBP11.03□□□□□ -0.64
KARS-207ENST00000566560 CDH1P12830 882 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PIK3CGP48736 1102 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 HERVK_113P63132 956 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 YBX1P67809 324 aaKnown RBP11.03□□□□□ -0.64
KARS-207ENST00000566560 PRR20EP86478 221 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PRR20CP86479 221 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PRR20DP86480 221 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PRR20BP86481 221 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PRR20AP86496 221 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PRDX1Q06830 199 aaKnown RBP11.03□□□□□ -0.64
KARS-207ENST00000566560 CDC16Q13042 620 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PCLAFQ15004 111 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 PCBP2Q15366 365 aaKnown RBP eCLIP11.03□□□□□ -0.64
KARS-207ENST00000566560 ARHGAP22Q7Z5H3 698 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 FAM129CQ86XR2 697 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 AGBL5Q8NDL9 886 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 GRAMD1AQ96CP6 724 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 CCDC126Q96EE4 140 aa11.03□□□□□ -0.64
KARS-207ENST00000566560 SLC41A2Q96JW4 573 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms