RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SLITRK4Q8IW52 837 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 UBTD2Q8WUN7 234 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 ADAMTS14Q8WXS8 1223 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 NSL1Q96IY1 281 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 OR4K3Q96R72 315 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 CD180Q99467 661 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 MIPEPQ99797 713 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 NUDT22Q9BRQ3 303 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 ATG10Q9H0Y0 220 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 CPSF2Q9P2I0 782 aaKnown RBP12.17□□□□□ -0.46
SF3B3-206ENST00000565990 XPR1Q9UBH6 696 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 POMT2Q9UKY4 750 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 PCDHB11Q9Y5F2 797 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 DCHS1Q96JQ0 3298 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 DCDC2BA2VCK2 349 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 PABPN1LA6NDY0 278 aaKnown RBP12.16□□□□□ -0.46
SF3B3-206ENST00000565990 TMX2-CTNND1H3BSU7 103 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 STX16-NPEPL1H3BU86 382 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 STX16O14662 325 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 DLX3O60479 287 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 T-ENOLP0DO92 83 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 THRAP10827 490 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 UGT2B7P16662 529 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 CCKBRP32239 447 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 PPP1CAP62136 330 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 PRKAA1Q13131 559 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 NAE1Q13564 534 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 TRA2AQ13595 282 aaKnown RBP eCLIP12.16□□□□□ -0.46
SF3B3-206ENST00000565990 SPIDRQ14159 915 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 PCBP2Q15366 365 aaKnown RBP eCLIP12.16□□□□□ -0.461e-17■■■□□ 16.7
SF3B3-206ENST00000565990 SLC5A12Q1EHB4 618 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 PTCHD3Q3KNS1 767 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 CAPN13Q6MZZ7 669 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-206ENST00000565990 ARMC6Q6NXE6 501 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 SPESP1Q6UW49 350 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 LCTLQ6UWM7 567 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 DHRS13Q6UX07 377 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 RBM44Q6ZP01 1051 aaKnown RBP12.16□□□□□ -0.46
SF3B3-206ENST00000565990 FRA10AC1Q70Z53 315 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 PRSS42Q7Z5A4 293 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 SYTL1Q8IYJ3 562 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 C2orf73Q8N5S3 287 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-206ENST00000565990 DCBLD1Q8N8Z6 715 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 PPFIBP2Q8ND30 876 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 RDH11Q8TC12 318 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 KLHL6Q8WZ60 621 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 ZUFSPQ96AP4 578 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 SCYL1Q96KG9 808 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 TMEM79Q9BSE2 394 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 BTBD10Q9BSF8 475 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 C1QTNF3Q9BXJ4 246 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 CD244Q9BZW8 370 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 CHRNA10Q9GZZ6 450 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 PCBD2Q9H0N5 130 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 SEMA6CQ9H3T2 930 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 SLCO1B3Q9NPD5 702 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 C1GALT1Q9NS00 363 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 CD274Q9NZQ7 290 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 TMEM9Q9P0T7 183 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-206ENST00000565990 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 KNTC1P50748 2209 aa12.16□□□□□ -0.46
SF3B3-206ENST00000565990 IGHV5-10-1A0A0J9YXX1 117 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 NCF1BA6NI72 391 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 NCF1CA8MVU1 366 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 ISM1B1AKI9 464 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 SUPT3HB4E1H0 165 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 D6RAR5 112 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 TK2O00142 265 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 SUPT3HO75486 399 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 STK16O75716 305 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 IPO13O94829 963 aaKnown RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 MT-CO3P00414 261 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 S100BP04271 92 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 ANKRD34CP0C6C1 535 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 NCF1P14598 390 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 LSSP48449 732 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 SERPINB4P48594 390 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 PDX1P52945 283 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 PRKAA2P54646 552 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 GFERP55789 205 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 ABATP80404 500 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 NFKB2Q00653 900 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 RELAQ04206 551 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 PFKFB4Q16877 469 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 ISXQ2M1V0 245 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 C18orf21Q32NC0 220 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 SUSD1Q6UWL2 747 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 RAB44Q7Z6P3 723 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 THOC6Q86W42 341 aaKnown RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 TMPRSS12Q86WS5 348 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.15□□□□□ -0.467e-6■■■□□ 16.3
SF3B3-206ENST00000565990 OR2L3Q8NG85 312 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 OR4K1Q8NGD4 311 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 STON2Q8WXE9 905 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 N4BP2L2Q92802 583 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 UTP4Q969X6 686 aaKnown RBP12.15□□□□□ -0.46
SF3B3-206ENST00000565990 SLC41A2Q96JW4 573 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 TGM7Q96PF1 710 aa12.15□□□□□ -0.46
SF3B3-206ENST00000565990 TRAPPC9Q96Q05 1148 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms