RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 EPB41L4BQ9H329 900 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 MRPS30Q9NP92 439 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 PCMTD2Q9NV79 361 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 CTNNAL1Q9UBT7 734 aa13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 MRPS18BQ9Y676 258 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-210ENST00000565966 COL6A6A6NMZ7 2263 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 POC1B-GALNT4F8VUJ3 575 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 TK2O00142 265 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 ZSCAN9O15535 394 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 SRPX2O60687 465 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 CCNDBP1O95273 360 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 RECKO95980 971 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 INHBAP08476 426 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 SLC35E2BP0CK96 405 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 CD1DP15813 335 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 CRABP2P29373 138 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 CSRP3P50461 194 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 AP1S2P56377 157 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 RPS15P62841 145 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 DLG1Q12959 904 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 CSHL1Q14406 222 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 TSNQ15631 228 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 ZXDCQ2QGD7 858 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 TCTE1Q5JU00 501 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 RHBDD2Q6NTF9 364 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 AGTRAPQ6RW13 159 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 PCSK4Q6UW60 755 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 RAPH1Q70E73 1250 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 ZNF655Q8N720 491 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 DCAKDQ8WVC6 231 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 FBXL8Q96CD0 374 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 DPH7Q9BTV6 452 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 UNKQ9C0B0 810 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 ATG10Q9H0Y0 220 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 CHST8Q9H2A9 424 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 PIEZO2Q9H5I5 2752 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 SLC6A20Q9NP91 592 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 IRAK4Q9NWZ3 460 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 ARL15Q9NXU5 204 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 UTP6Q9NYH9 597 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 ANKMY1Q9P2S6 941 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 TAC3Q9UHF0 121 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 SRPK3Q9UPE1 567 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 FARSAQ9Y285 508 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 OARD1Q9Y530 152 aa13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 V9GYY5 206 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-210ENST00000565966 MED13Q9UHV7 2174 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 OR2A25A4D2G3 310 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 PABPN1LA6NDY0 278 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 CREG1O75629 220 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 GUCA1CO95843 209 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 CTSBP07858 339 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 RAB40ALP0C0E4 278 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 AGXTP21549 392 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 GCAP28676 217 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 PTPN4P29074 926 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 MSH2P43246 934 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 SERPINB9P50453 376 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ARSFP54793 590 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ATP6V0D1P61421 351 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 TBPL1P62380 186 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 VSNL1P62760 191 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ABATP80404 500 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 CDKL1Q00532 357 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 CDC20Q12834 499 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 NAE1Q13564 534 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 SLC29A2Q14542 456 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 TBR1Q16650 682 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 THEMIS2Q5TEJ8 643 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ICE2Q659A1 982 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 C16orf46Q6P387 395 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ADAMTSL2Q86TH1 951 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 PROKR1Q8TCW9 393 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 EXTL1Q92935 676 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 SELENOSQ9BQE4 189 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ARHGAP9Q9BRR9 750 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 NDC1Q9BTX1 674 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 DHRS4Q9BTZ2 278 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 CCDC177Q9NQR7 707 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ENAMQ9NRM1 1142 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 SNX15Q9NRS6 342 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 TXLNGQ9NUQ3 528 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ABCF3Q9NUQ8 709 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ZNF180Q9UJW8 692 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 IKBKGQ9Y6K9 419 aa13.25□□□□□ -0.29
HERPUD1-210ENST00000565966 ATRXP46100 2492 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 IGKV1-8A0A0C4DH67 115 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 A0A0J9YVX5 310 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 EXOC1LA0A1B0GW35 172 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 EIF4E1BA6NMX2 242 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 NRP2O60462 931 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 CTSVO60911 334 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 ALDOAP04075 364 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 C2P06681 752 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 PRKAR1AP10644 381 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 CCND1P24385 295 aa13.24□□□□□ -0.29
HERPUD1-210ENST00000565966 SLC26A3P40879 764 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms