RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 MPC1LP0DKB6 136 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 ERVK-10P10266 1014 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 PIM1P11309 404 aaPredicted RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 ENO3P13929 434 aaPredicted RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 GNLYP22749 145 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 GABRB3P28472 473 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 IMPA1P29218 277 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 HSD17B2P37059 387 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 ARF3P61204 181 aaPredicted RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 TAP2Q03519 686 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 PRDX1Q06830 199 aaKnown RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 DHX9Q08211 1270 aaKnown RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 PTK6Q13882 451 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 NAA25Q14CX7 972 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 FAM214AQ32MH5 1076 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 ICE2Q659A1 982 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 ZNF425Q6IV72 752 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 KIRREL2Q6UWL6 708 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 PAQR7Q86WK9 346 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 IGDCC3Q8IVU1 814 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 FAM26EQ8N5C1 309 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 FBXO15Q8NCQ5 510 aaPredicted RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 C2CD4AQ8NCU7 369 aaPredicted RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 INPP5DQ92835 1189 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 SLCO2A1Q92959 643 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 PNPLA2Q96AD5 504 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 NACC2Q96BF6 587 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 NDNQ99608 321 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 PLAC1Q9HBJ0 212 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 ZBTB20Q9HC78 741 aaPredicted RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 SLAMF7Q9NQ25 335 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 ABCF3Q9NUQ8 709 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 C5AR2Q9P296 337 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 ANKMY1Q9P2S6 941 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 SLC17A6Q9P2U8 582 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 NXT1Q9UKK6 140 aaKnown RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 COMMD10Q9Y6G5 202 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 USP9XQ93008 2570 aaPredicted RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 RP1L1Q8IWN7 2480 aaPredicted RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 MDC1Q14676 2089 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 ZNF839A8K0R7 811 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 FFAR3O14843 346 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 HAT1O14929 419 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 GPR42O15529 346 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 VPS4BO75351 444 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 VPS26AO75436 327 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 CCNDBP1O95273 360 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 ALPPP05187 535 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 EZRP15311 586 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 TCP1P17987 556 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 ITGA3P26006 1051 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 IVDP26440 423 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 SKIV2L2P42285 1042 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 SOX8P57073 446 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 SNRPNP63162 240 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 KLC1Q07866 573 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 AIMP2Q13155 320 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 MUM1Q2TAK8 710 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 HKDC1Q2TB90 917 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 PLEKHN1Q494U1 663 aaPredicted RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 RBM20Q5T481 1227 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 PRMT9Q6P2P2 845 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 IGFL3Q6UXB1 125 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 MBOAT1Q6ZNC8 495 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 CNTN4Q8IWV2 1026 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 PRSS58Q8IYP2 241 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 ARHGEF39Q8N4T4 335 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 CSNK1A1LQ8N752 337 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 GALNT11Q8NCW6 608 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 OR11G2Q8NGC1 345 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 STT3BQ8TCJ2 826 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 COL26A1Q96A83 441 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 CABS1Q96KC9 395 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 CAPZA3Q96KX2 299 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 OR2A5Q96R48 311 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 EBNA1BP2Q99848 306 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 WDR83Q9BRX9 315 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 CRB3Q9BUF7 120 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 ZNF304Q9HCX3 659 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 ATP13A2Q9NQ11 1180 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 SEMA3GQ9NS98 782 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 CUEDC1Q9NWM3 386 aaPredicted RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 PCYOX1Q9UHG3 505 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 ADAMTS6Q9UKP5 1117 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 VPS4AQ9UN37 437 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 RUVBL1Q9Y265 456 aaKnown RBP9.56□□□□□ -0.88
CMTM3-209ENST00000565003 DOCK10Q96BY6 2186 aa9.56□□□□□ -0.88
CMTM3-209ENST00000565003 IGLV3-12A0A075B6K2 115 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 TCP11X1B4DZS4 312 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 EIF3FO00303 357 aaPredicted RBP9.55□□□□□ -0.88
CMTM3-209ENST00000565003 P2RX6O15547 441 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 ZBTB14O43829 449 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 IPO13O94829 963 aaKnown RBP9.55□□□□□ -0.88
CMTM3-209ENST00000565003 STATHP02808 62 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 ZGLP1P0C6A0 271 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 FBLP22087 321 aaKnown RBP9.55□□□□□ -0.88
CMTM3-209ENST00000565003 PGGT1BP53609 377 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 EMP3P54852 163 aa9.55□□□□□ -0.88
CMTM3-209ENST00000565003 CDKN2DP55273 166 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms