RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CCDC177Q9NQR7 707 aaPredicted RBP3.97□□□□□ -1.77
UBR1-205ENST00000564540 ANAPC2Q9UJX6 822 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 CPSF3Q9UKF6 684 aaKnown RBP3.97□□□□□ -1.77
UBR1-205ENST00000564540 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.97□□□□□ -1.77
UBR1-205ENST00000564540 TRPV2Q9Y5S1 764 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 ZNF318Q5VUA4 2279 aa3.97□□□□□ -1.77
UBR1-205ENST00000564540 A0A1W2PPK0 400 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 PTGESO14684 152 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 GP1BBP13224 206 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 RPL35AP18077 110 aaKnown RBP3.96□□□□□ -1.78
UBR1-205ENST00000564540 CD22P20273 847 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 TSFMP43897 325 aaKnown RBP3.96□□□□□ -1.78
UBR1-205ENST00000564540 DNA2P51530 1060 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 VAMP7P51809 220 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 CUL3Q13618 768 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 VWC2Q2TAL6 325 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 GPR33Q49SQ1 333 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 ZNF774Q6NX45 483 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 AVL9Q8NBF6 648 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 OR7A2PQ8NGA2 310 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 ATP8B4Q8TF62 1192 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 SECISBP2LQ93073 1101 aaKnown RBP3.96□□□□□ -1.78
UBR1-205ENST00000564540 MOB3AQ96BX8 217 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 LINC00615Q96LM1 132 aaPredicted RBP3.96□□□□□ -1.78
UBR1-205ENST00000564540 FAM218AQ96MZ4 157 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 SLC2A11Q9BYW1 496 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 PANK2Q9BZ23 570 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 MED20Q9H944 212 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 IL17BQ9UHF5 180 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 CHKBQ9Y259 395 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 FAM169AQ9Y6X4 670 aa3.96□□□□□ -1.78
UBR1-205ENST00000564540 MYH14Q7Z406 1995 aaKnown RBP3.95□□□□□ -1.78
UBR1-205ENST00000564540 A0A087WUV0 522 aaPredicted RBP3.95□□□□□ -1.78
UBR1-205ENST00000564540 TRBV5-5A0A0J9YX44 114 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 TEX28O15482 410 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 SRSF10O75494 262 aaKnown RBP3.95□□□□□ -1.78
UBR1-205ENST00000564540 AZGP1P25311 298 aaKnown RBP3.95□□□□□ -1.78
UBR1-205ENST00000564540 HLA-FP30511 346 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 SOX3P41225 446 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 CCR3P51677 355 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 TMEM50BP56557 158 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 POLR2LP62875 67 aaKnown RBP3.95□□□□□ -1.78
UBR1-205ENST00000564540 IFI35P80217 286 aaPredicted RBP3.95□□□□□ -1.78
UBR1-205ENST00000564540 CDH18Q13634 790 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 FRRS1Q6ZNA5 592 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 NDUFAF2Q8N183 169 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 SLC4A11Q8NBS3 891 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 ARSGQ96EG1 525 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 FOXN4Q96NZ1 517 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 AGAP4Q96P64 663 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 CPNE1Q99829 537 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 PRRG4Q9BZD6 226 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 NYXQ9GZU5 481 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 CDH20Q9HBT6 801 aa3.95□□□□□ -1.78
UBR1-205ENST00000564540 EDDM13A0A1B0GTR0 161 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 A0A1W2PPR1 153 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 CASTOR2A6NHX0 329 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 H0YAE9 185 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 O00370 1275 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 PSMD10O75832 226 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 STARD3NLO95772 234 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 ATP1B1P05026 303 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 ALDH3A2P51648 485 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 MYL7Q01449 175 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 PAX8Q06710 450 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 SNTB1Q13884 538 aaKnown RBP3.94□□□□□ -1.78
UBR1-205ENST00000564540 TMEM132DQ14C87 1099 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 MTHFSDQ2M296 383 aaKnown RBP3.94□□□□□ -1.78
UBR1-205ENST00000564540 OR4A47Q6IF82 309 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 ZBTB49Q6ZSB9 765 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 IL17RELQ6ZVW7 336 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 CDC20BQ86Y33 519 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 CNRIP1Q96F85 164 aaPredicted RBP3.94□□□□□ -1.78
UBR1-205ENST00000564540 C2orf48Q96LS8 159 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 FEVQ99581 238 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 TRIM6Q9C030 488 aaPredicted RBP3.94□□□□□ -1.78
UBR1-205ENST00000564540 MTMR12Q9C0I1 747 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 SLC7A10Q9NS82 523 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 NDE1Q9NXR1 346 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 AGRNO00468 2067 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 ABCA7Q8IZY2 2146 aa3.94□□□□□ -1.78
UBR1-205ENST00000564540 TCRBV21S2A2A0A5A6 115 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 CCL24O00175 119 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 TADA2AO75478 443 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 CSN3P07498 182 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 NR2F1P10589 423 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 PRKAR1AP10644 381 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 ALDH1B1P30837 517 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 MC5RP33032 325 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 TRAP1Q12931 704 aaKnown RBP3.93□□□□□ -1.78
UBR1-205ENST00000564540 PTPRCAPQ14761 206 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 PTPN14Q15678 1187 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 CENPVQ7Z7K6 275 aaPredicted RBP3.93□□□□□ -1.78
UBR1-205ENST00000564540 OR2L2Q8NH16 312 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 RASL10AQ92737 203 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 ATXN7L3BQ96GX2 97 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 MUS81Q96NY9 551 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 RAB11FIP5Q9BXF6 653 aa3.93□□□□□ -1.78
UBR1-205ENST00000564540 TDRD1Q9BXT4 1180 aaKnown RBP3.93□□□□□ -1.78
UBR1-205ENST00000564540 B3GAT2Q9NPZ5 323 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms