RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TFDP2Q14188 446 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 TCEAL1Q15170 157 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 HKDC1Q2TB90 917 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 DNAJC21Q5F1R6 531 aaKnown RBP9.81□□□□□ -0.84
SF3B3-204ENST00000563739 TFDP3Q5H9I0 405 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 ANKRD20A2Q5SQ80 823 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 ANKRD20A1Q5TYW2 823 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF468Q5VIY5 522 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-204ENST00000563739 ANKRD20A3Q5VUR7 823 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 PRMT9Q6P2P2 845 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 FBXO42Q6P3S6 717 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 CRLF3Q8IUI8 442 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 DCUN1D3Q8IWE4 304 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 OR2L3Q8NG85 312 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 CHTF18Q8WVB6 975 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 IQCDQ96DY2 449 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 MAGED4Q96JG8 741 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 MIPEPQ99797 713 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
SF3B3-204ENST00000563739 TGIF2Q9GZN2 237 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 VPS37BQ9H9H4 285 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 SPTLC3Q9NUV7 552 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 DDX56Q9NY93 547 aaKnown RBP9.81□□□□□ -0.84
SF3B3-204ENST00000563739 IL1RAPL1Q9NZN1 696 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 ZC3H7BQ9UGR2 993 aaKnown RBP9.81□□□□□ -0.84
SF3B3-204ENST00000563739 LCMT1Q9UIC8 334 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 NPIPA1Q9UND3 350 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 RUVBL1Q9Y265 456 aaKnown RBP9.81□□□□□ -0.84
SF3B3-204ENST00000563739 ZANQ9Y493 2812 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 JMJD1CQ15652 2540 aa9.81□□□□□ -0.84
SF3B3-204ENST00000563739 CCDC162PA2VCL2 907 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 OR2W5A6NFC9 320 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 TARM1B6A8C7 271 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 E9PLN8 166 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 H0YGG7 62 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 SEC24DO94855 1032 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-204ENST00000563739 FTH1P02794 183 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 KLK2P20151 261 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 MSX1P28360 303 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 PTGER1P34995 402 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 CD96P40200 585 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 ARF3P61204 181 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-204ENST00000563739 MAT1AQ00266 395 aaKnown RBP9.8□□□□□ -0.84
SF3B3-204ENST00000563739 OCA2Q04671 838 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 FASTKQ14296 549 aaKnown RBP9.8□□□□□ -0.84
SF3B3-204ENST00000563739 ZC3H12BQ5HYM0 836 aaKnown RBP9.8□□□□□ -0.84
SF3B3-204ENST00000563739 TAS2R42Q7RTR8 314 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 PRSS41Q7RTY9 318 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 PAQR7Q86WK9 346 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 VSTM4Q8IW00 320 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 DMRTC2Q8IXT2 367 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-204ENST00000563739 KATNAL2Q8IYT4 538 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 HMGCLL1Q8TB92 370 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 ACTL9Q8TC94 416 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 P3H4Q92791 437 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 SDCCAG3Q96C92 435 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF778Q96MU6 729 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 CHP1Q99653 195 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 FOXC2Q99958 501 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 VKORC1Q9BQB6 163 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 VN1R1Q9GZP7 353 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 KLHL1Q9NR64 748 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 C14orf105Q9NVL8 296 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF358Q9NW07 568 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 ANKRD10Q9NXR5 420 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 SLC2A6Q9UGQ3 507 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 SCN3AQ9NY46 2000 aa9.8□□□□□ -0.84
SF3B3-204ENST00000563739 FAM227AF5H4B4 570 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 APOC4-APOC2K7ER74 178 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 PSTPIP1O43586 416 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 ASNA1O43681 348 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 SRPX2O60687 465 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-204ENST00000563739 WFS1O76024 890 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 METTL18O95568 372 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 APOC2P02655 101 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 ERGP11308 486 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 ESRRAP11474 423 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-204ENST00000563739 MSNP26038 577 aaKnown RBP9.79□□□□□ -0.84
SF3B3-204ENST00000563739 AOAHP28039 575 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 TRIM14Q14142 442 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 POU6F1Q14863 301 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 FAM214AQ32MH5 1076 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 SYTL3Q4VX76 610 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 EMC4Q5J8M3 183 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 ACER2Q5QJU3 275 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 ZNF425Q6IV72 752 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 UNC5DQ6UXZ4 953 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 BZW1Q7L1Q6 419 aaKnown RBP9.79□□□□□ -0.84
SF3B3-204ENST00000563739 KRT222Q8N1A0 295 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 HDAC10Q969S8 669 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 ZUFSPQ96AP4 578 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 SPATA13Q96N96 652 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 OR2A5Q96R48 311 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 DNAJC7Q99615 494 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 TUBB6Q9BUF5 446 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 HEMGNQ9BXL5 484 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 UCK2Q9BZX2 261 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 TRPC4Q9UBN4 977 aa9.79□□□□□ -0.84
SF3B3-204ENST00000563739 LUC7L2Q9Y383 392 aaKnown RBP9.79□□□□□ -0.84
SF3B3-204ENST00000563739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms