RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 TRIM73Q86UV7 250 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 CILP2Q8IUL8 1156 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 C4orf33Q8N1A6 199 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 OR8K5Q8NH50 307 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 PNPLA2Q96AD5 504 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 VPS39Q96JC1 886 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 LINC00615Q96LM1 132 aaPredicted RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 XKR8Q9H6D3 395 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 SSU72Q9NP77 194 aaKnown RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 SLAMF7Q9NQ25 335 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 FBXO6Q9NRD1 293 aaPredicted RBP12.88□□□□□ -0.35
SPG7-207ENST00000563218 C1GALT1Q9NS00 363 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 GPR83Q9NYM4 423 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 ACSL5Q9ULC5 683 aa12.88□□□□□ -0.35
SPG7-207ENST00000563218 TMEM120BA0PK00 339 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 GOLGA8RI6L899 631 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 PFDN6O15212 129 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 ZNF749O43361 778 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 DPM1O60762 260 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 CNOT3O75175 753 aaKnown RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 CBSLP0DN79 551 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 CREB1P16220 341 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 CYP2A7P20853 494 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 PDHA2P29803 388 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 PRDX3P30048 256 aaKnown RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 CBSP35520 551 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 PREPP48147 710 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 PRLHRP49683 370 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 SERPINB8P50452 374 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 PRKAA1Q13131 559 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 PLEKHN1Q494U1 663 aaPredicted RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 ZNF658BQ4V348 819 aaPredicted RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 ZRANB3Q5FWF4 1079 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 AARS2Q5JTZ9 985 aaKnown RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 C1orf189Q5VU69 101 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 CDHR3Q6ZTQ4 885 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 ZC3HC1Q86WB0 502 aaKnown RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 PHC3Q8NDX5 983 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 ACVR1CQ8NER5 493 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 OR52E1Q8NGJ3 308 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 HM13Q8TCT9 377 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 ACMSDQ8TDX5 336 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 LCN9Q8WX39 176 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPG7-207ENST00000563218 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 SGSM3Q96HU1 749 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 FERD3LQ96RJ6 166 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 SMAD5Q99717 465 aaKnown RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 HGH1Q9BTY7 390 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 PITPNM3Q9BZ71 974 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 OR52A5Q9H2C5 316 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 SRMSQ9H3Y6 488 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 COG4Q9H9E3 785 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 FANCEQ9HB96 536 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 FAM60AQ9NP50 221 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 ASF1BQ9NVP2 202 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 NKIRAS1Q9NYS0 192 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 MARCH4Q9P2E8 410 aaPredicted RBP12.87□□□□□ -0.35
SPG7-207ENST00000563218 NTNG1Q9Y2I2 539 aa12.87□□□□□ -0.35
SPG7-207ENST00000563218 HMX2A2RU54 273 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 AGAP14A8MT82 685 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 H3BMH7 237 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 PRPF4O43172 522 aaKnown RBP eCLIP12.86□□□□□ -0.356e-7■■■□□ 15.8
SPG7-207ENST00000563218 SPAG7O75391 227 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 KLF7O75840 302 aaPredicted RBP12.86□□□□□ -0.35
SPG7-207ENST00000563218 HAUS5O94927 633 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 LDLRP01130 860 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 F7P08709 466 aaPredicted RBP12.86□□□□□ -0.35
SPG7-207ENST00000563218 PYGBP11216 843 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 NDUFS1P28331 727 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 GABRB3P28472 473 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 TYK2P29597 1187 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 FOXN2P32314 431 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 DCTP40126 519 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 SLC18A2Q05940 514 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 CACNG1Q06432 222 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 PRKG2Q13237 762 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 KRT33BQ14525 404 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 SLC9A5Q14940 896 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 ZIC1Q15915 447 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 MRGPREQ86SM8 312 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 ADGRF3Q8IZF5 1079 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 CARFQ8N187 725 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 CISD2Q8N5K1 135 aaKnown RBP12.86□□□□□ -0.35
SPG7-207ENST00000563218 ANKRD42Q8N9B4 389 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 ZFPM2Q8WW38 1151 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 TCF12Q99081 682 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 GPR22Q99680 433 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 MCMBPQ9BTE3 642 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 ZBTB20Q9HC78 741 aaPredicted RBP12.86□□□□□ -0.35
SPG7-207ENST00000563218 INTS10Q9NVR2 710 aaKnown RBP12.86□□□□□ -0.35
SPG7-207ENST00000563218 CUEDC1Q9NWM3 386 aaPredicted RBP12.86□□□□□ -0.35
SPG7-207ENST00000563218 CRLS1Q9UJA2 301 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 ADAM21Q9UKJ8 722 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 CORO1CQ9ULV4 474 aaPredicted RBP12.86□□□□□ -0.35
SPG7-207ENST00000563218 ICKQ9UPZ9 632 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 VPS9D1Q9Y2B5 631 aa12.86□□□□□ -0.35
SPG7-207ENST00000563218 MTO1Q9Y2Z2 717 aaKnown RBP12.86□□□□□ -0.35
SPG7-207ENST00000563218 PCDHGB7Q9Y5F8 929 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms