RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TSPAN17Q96FV3 270 aa15.89■□□□□ 0.13
CDT1-202ENST00000562747 GPR22Q99680 433 aa15.89■□□□□ 0.13
CDT1-202ENST00000562747 TRIM54Q9BYV2 358 aa15.89■□□□□ 0.13
CDT1-202ENST00000562747 SLC7A5P2Q9GIP4 190 aa15.89■□□□□ 0.13
CDT1-202ENST00000562747 ACTR5Q9H9F9 607 aaPredicted RBP15.89■□□□□ 0.13
CDT1-202ENST00000562747 MRPS30Q9NP92 439 aaKnown RBP15.89■□□□□ 0.13
CDT1-202ENST00000562747 EURLQ9NYK6 297 aa15.89■□□□□ 0.13
CDT1-202ENST00000562747 STOX2Q9P2F5 926 aaPredicted RBP15.89■□□□□ 0.13
CDT1-202ENST00000562747 TAC3Q9UHF0 121 aa15.89■□□□□ 0.13
CDT1-202ENST00000562747 NOVA2Q9UNW9 492 aaKnown RBP15.89■□□□□ 0.13
CDT1-202ENST00000562747 MTO1Q9Y2Z2 717 aaKnown RBP15.89■□□□□ 0.13
CDT1-202ENST00000562747 PABPN1LA6NDY0 278 aaKnown RBP15.88■□□□□ 0.13
CDT1-202ENST00000562747 ZNF749O43361 778 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 HCRTR1O43613 425 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 DLSTP36957 453 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 ABATP80404 500 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 GPS2Q13227 327 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 TSTA3Q13630 321 aaPredicted RBP15.88■□□□□ 0.13
CDT1-202ENST00000562747 USP10Q14694 798 aaKnown RBP15.88■□□□□ 0.13
CDT1-202ENST00000562747 PHKG1Q16816 387 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 LACTB2Q53H82 288 aaPredicted RBP15.88■□□□□ 0.13
CDT1-202ENST00000562747 PRAMEF17Q5VTA0 474 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 ICE2Q659A1 982 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 ZNF517Q6ZMY9 492 aaPredicted RBP15.88■□□□□ 0.13
CDT1-202ENST00000562747 MCATQ8IVS2 390 aaKnown RBP15.88■□□□□ 0.13
CDT1-202ENST00000562747 CEP97Q8IW35 865 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 SLC38A9Q8NBW4 561 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 PPFIBP2Q8ND30 876 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 CLIP3Q96DZ5 547 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 ACAT2Q9BWD1 397 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 GPAMQ9HCL2 828 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 CCDC177Q9NQR7 707 aaPredicted RBP15.88■□□□□ 0.13
CDT1-202ENST00000562747 ENAMQ9NRM1 1142 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 UTP6Q9NYH9 597 aaKnown RBP15.88■□□□□ 0.13
CDT1-202ENST00000562747 NINJ2Q9NZG7 142 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 KCND3Q9UK17 655 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 CROTQ9UKG9 612 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 TP53TG5Q9Y2B4 290 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 PCDHGA6Q9Y5G7 932 aa15.88■□□□□ 0.13
CDT1-202ENST00000562747 TEX15Q9BXT5 2789 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 PCM1Q15154 2024 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 OR2A25A4D2G3 310 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 C21orf140B9A014 251 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 ZSCAN9O15535 394 aaPredicted RBP15.87■□□□□ 0.13
CDT1-202ENST00000562747 SRPX2O60687 465 aaPredicted RBP15.87■□□□□ 0.13
CDT1-202ENST00000562747 WISP3O95389 354 aaPredicted RBP15.87■□□□□ 0.13
CDT1-202ENST00000562747 STMN1P16949 149 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 CCND1P24385 295 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 RORAP35398 523 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 MC1RQ01726 317 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 ZNF460Q14592 562 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 TCTE1Q5JU00 501 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 RNF44Q7L0R7 432 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 IFT20Q8IY31 132 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 DSELQ8IZU8 1212 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 MIB2Q96AX9 1013 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 CYTH2Q99418 400 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 DPH2Q9BQC3 489 aaPredicted RBP15.87■□□□□ 0.13
CDT1-202ENST00000562747 DPH7Q9BTV6 452 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 FUT8Q9BYC5 575 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 SPRTNQ9H040 489 aaPredicted RBP15.87■□□□□ 0.13
CDT1-202ENST00000562747 PCBD2Q9H0N5 130 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 CDC42EP4Q9H3Q1 356 aaKnown RBP15.87■□□□□ 0.13
CDT1-202ENST00000562747 L2HGDHQ9H9P8 463 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 SLC6A20Q9NP91 592 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 PCMTD2Q9NV79 361 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 IRAK4Q9NWZ3 460 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 SRPK3Q9UPE1 567 aa15.87■□□□□ 0.13
CDT1-202ENST00000562747 MEN1O00255 615 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 CTSVO60911 334 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 FURINP09958 794 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 TCN2P20062 427 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 TBPL1P62380 186 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 RELAQ04206 551 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 DNASE1L3Q13609 305 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 ZKSCAN8Q15776 578 aaPredicted RBP15.86■□□□□ 0.13
CDT1-202ENST00000562747 CRTC2Q53ET0 693 aaPredicted RBP15.86■□□□□ 0.13
CDT1-202ENST00000562747 THEMIS2Q5TEJ8 643 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 RHBDD2Q6NTF9 364 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 AGTRAPQ6RW13 159 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 SBSNQ6UWP8 590 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 MBOAT1Q6ZNC8 495 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 PROKR1Q8TCW9 393 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 CT55Q8WUE5 264 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 ANKRD49Q8WVL7 239 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 ATL1Q8WXF7 558 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 MR1Q95460 341 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 ZNF285Q96NJ3 590 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 PSMG3-AS1Q96PY0 264 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 PLCD4Q9BRC7 762 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 GPR87Q9BY21 358 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 DERL2Q9GZP9 239 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 ACSS3Q9H6R3 686 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 AKIRIN1Q9H9L7 192 aaPredicted RBP15.86■□□□□ 0.13
CDT1-202ENST00000562747 CAB39LQ9H9S4 337 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 ARL15Q9NXU5 204 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 KCNMB2Q9Y691 235 aa15.86■□□□□ 0.13
CDT1-202ENST00000562747 IGKV1-8A0A0C4DH67 115 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 FAM155BO75949 473 aa15.85■□□□□ 0.13
CDT1-202ENST00000562747 AGXTP21549 392 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms