RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 RUVBL1Q9Y265 456 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-AS1-201ENST00000562298 CRYL1Q9Y2S2 319 aa15.9■□□□□ 0.14
VPS9D1-AS1-201ENST00000562298 MDC1Q14676 2089 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-AS1-201ENST00000562298 MYO1CO00159 1063 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 AP3B1O00203 1094 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PSIP1O75475 530 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ESR1P03372 595 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TPSB2P20231 275 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CDC25BP30305 580 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 EMP3P54852 163 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ADARP55265 1226 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 DSG2Q14126 1118 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TPSAB1Q15661 275 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 HKDC1Q2TB90 917 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ANKRD20A4Q4UJ75 823 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ACSBG2Q5FVE4 666 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 RNF187Q5TA31 235 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 RPUSD3Q6P087 351 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 FAM180AQ6UWF9 173 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 C4orf22Q6V702 233 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 GSTA5Q7RTV2 222 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 SDCCAG8Q86SQ7 713 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PAQR7Q86WK9 346 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 SPNS2Q8IVW8 549 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 KBTBD2Q8IY47 623 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CABS1Q96KC9 395 aa15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TRIM56Q9BRZ2 755 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 MRPS30Q9NP92 439 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 NSG1A0A0A6YYJ2 146 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 A0A1W2PQ72 361 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 IDSB3KWA1 339 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 H3BMM5 538 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 AVILO75366 819 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 USP1O94782 785 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CELA2AP08217 269 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PRR35P0CG20 571 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CHRM3P20309 590 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 RPA3P35244 121 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 SOX11P35716 441 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 SLC26A3P40879 764 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 KCNJ11Q14654 390 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 NAA25Q14CX7 972 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 KLHL38Q2WGJ6 581 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 KIAA0930Q6ICG6 404 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ZNF425Q6IV72 752 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CENPUQ71F23 418 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 NDUFAF7Q7L592 441 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ARHGEF39Q8N4T4 335 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CSNK1A1LQ8N752 337 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 AMER2Q8N7J2 671 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 AMER3Q8N944 861 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PPFIBP2Q8ND30 876 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 BRIX1Q8TDN6 353 aaKnown RBP15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 SMPDL3AQ92484 453 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 OR2A5Q96R48 311 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TCF12Q99081 682 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PKP4Q99569 1192 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 SLC30A3Q99726 388 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PTGFRNQ9P2B2 879 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TRPC4Q9UBN4 977 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TAC3Q9UHF0 121 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ZKSCAN5Q9Y2L8 839 aa15.88■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 IGHV1-45A0A0A0MS14 117 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PHF2O75151 1096 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 VPS26AO75436 327 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 FGGP02679 453 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 F7P08709 466 aaPredicted RBP15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PKMP14618 531 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 OGNP20774 298 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CLCN7P51798 805 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 EFNA3P52797 238 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TERF1P54274 439 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 EMP2P54851 167 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ARG2P78540 354 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CDK16Q00536 496 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 EEF1A2Q05639 463 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ARHGAP19Q14CB8 494 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ZRSR2Q15696 482 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 C1QL3Q5VWW1 255 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ICE2Q659A1 982 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ZNF324BQ6AW86 544 aaPredicted RBP15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 FAAH2Q6GMR7 532 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TICAM1Q8IUC6 712 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CILP2Q8IUL8 1156 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 SIRT6Q8N6T7 355 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 OR1N1Q8NGS0 311 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 MVB12AQ96EY5 273 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 TAAR6Q96RI8 345 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 OLAHQ9NV23 265 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PLA2G3Q9NZ20 509 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CDC14AQ9UNH5 594 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 MRPS2Q9Y399 296 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 POLEQ07864 2286 aa15.87■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CPAMD8Q8IZJ3 1885 aa15.86■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 CACNA1DQ01668 2161 aa15.86■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 FBN2P35556 2912 aa15.86■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 PFDN6O15212 129 aa15.86■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 P2RX6O15547 441 aa15.86■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 FOXS1O43638 330 aa15.86■□□□□ 0.13
VPS9D1-AS1-201ENST00000562298 ZG16O60844 167 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms