RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ASPDHA6ND91 283 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 RCCD1A6NED2 376 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 TTI1O43156 1089 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 SRSF11Q05519 484 aaKnown RBP17.59■□□□□ 0.41
TPM1-226ENST00000560959 ZNF33BQ06732 778 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 H3F3CQ6NXT2 135 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 CAVIN1Q6NZI2 390 aaKnown RBP17.59■□□□□ 0.41
TPM1-226ENST00000560959 AFTPHQ6ULP2 937 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 LINC00523Q86TU6 105 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 AMER3Q8N944 861 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 OR13J1Q8NGT2 312 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 CABS1Q96KC9 395 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 ZNF354BQ96LW1 612 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 OSBPL8Q9BZF1 889 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 CIDEBQ9UHD4 219 aa17.59■□□□□ 0.41
TPM1-226ENST00000560959 H0YGG7 62 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 CDK2AP1O14519 115 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 C1orf105O95561 183 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 TPM1P09493 284 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 CCNFP41002 786 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 ARF3P61204 181 aaPredicted RBP17.58■□□□□ 0.4
TPM1-226ENST00000560959 PMP22Q01453 160 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 P3H1Q32P28 736 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 NEK10Q6ZWH5 1172 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 EID3Q8N140 333 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 OR4L1Q8NH43 312 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 MAGEC3Q8TD91 643 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 HDAC10Q969S8 669 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 YIPF2Q9BWQ6 316 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 STOX2Q9P2F5 926 aaPredicted RBP17.58■□□□□ 0.4
TPM1-226ENST00000560959 MKL2Q9ULH7 1088 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 PCDHA3Q9Y5H8 950 aa17.58■□□□□ 0.4
TPM1-226ENST00000560959 CPAMD8Q8IZJ3 1885 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 A0A1W2PPV9 198 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 MACROD2A1Z1Q3 448 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 E9PLN8 166 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 KPNA5O15131 536 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 VPS26AO75436 327 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 TJP3O95049 919 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 METTL18O95568 372 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 GOT2P00505 430 aaKnown RBP17.57■□□□□ 0.4
TPM1-226ENST00000560959 PSMB5P28074 263 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 CMPK1P30085 196 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 CTNNA1P35221 906 aaKnown RBP17.57■□□□□ 0.4
TPM1-226ENST00000560959 CSNK1G2P78368 415 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 ALDH6A1Q02252 535 aaKnown RBP17.57■□□□□ 0.4
TPM1-226ENST00000560959 RELAQ04206 551 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 ACVR1Q04771 509 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 TMED2Q15363 201 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 ACER2Q5QJU3 275 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 PLAG1Q6DJT9 500 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 MDS2Q8NDY4 140 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 GSDMBQ8TAX9 411 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 MMABQ96EY8 250 aaPredicted RBP17.57■□□□□ 0.4
TPM1-226ENST00000560959 VKORC1Q9BQB6 163 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 SPATA7Q9P0W8 599 aa17.57■□□□□ 0.4
TPM1-226ENST00000560959 TXNDC9O14530 226 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 ANXA5P08758 320 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 C8orf89P0DMQ9 161 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 CETN2P41208 172 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 MAGEA1P43355 309 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 FAM53BQ14153 422 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 ARHGEF39Q8N4T4 335 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 METTL21AQ8WXB1 218 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 PEX13Q92968 403 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 SCMH1Q96GD3 660 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 PANX3Q96QZ0 392 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 PLCD4Q9BRC7 762 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 DPH7Q9BTV6 452 aa17.56■□□□□ 0.4
TPM1-226ENST00000560959 TTC7AQ9ULT0 858 aaPredicted RBP17.56■□□□□ 0.4
TPM1-226ENST00000560959 RUVBL1Q9Y265 456 aaKnown RBP17.56■□□□□ 0.4
TPM1-226ENST00000560959 IQCF5A8MTL0 148 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 PRMT5O14744 637 aaPredicted RBP17.55■□□□□ 0.4
TPM1-226ENST00000560959 FOXS1O43638 330 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 ASNA1O43681 348 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 NRP2O60462 931 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 MFAP3LO75121 409 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 GAS8O95995 478 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 EEF1DP29692 281 aaKnown RBP17.55■□□□□ 0.4
TPM1-226ENST00000560959 CDH17Q12864 832 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 TUBA3CQ13748 450 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 CCDC38Q502W7 563 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 FASTKD1Q53R41 847 aaKnown RBP17.55■□□□□ 0.4
TPM1-226ENST00000560959 AARS2Q5JTZ9 985 aaKnown RBP17.55■□□□□ 0.4
TPM1-226ENST00000560959 TSTD2Q5T7W7 516 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 LRRC8BQ6P9F7 803 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 TUBA3EQ6PEY2 450 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 MEX3BQ6ZN04 569 aaKnown RBP17.55■□□□□ 0.4
TPM1-226ENST00000560959 ZNF534Q76KX8 674 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 SIAH3Q8IW03 269 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 ZC3H7AQ8IWR0 971 aaKnown RBP17.55■□□□□ 0.4
TPM1-226ENST00000560959 CSNK1A1LQ8N752 337 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 TMEM178AQ8NBL3 297 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 LKAAEAR1Q8TD35 194 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 CA5BP1Q8WTZ4 195 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 CALR3Q96L12 384 aaKnown RBP17.55■□□□□ 0.4
TPM1-226ENST00000560959 FOPNLQ96NB1 174 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 DMRTA2Q96SC8 542 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 FAM118BQ9BPY3 351 aa17.55■□□□□ 0.4
TPM1-226ENST00000560959 DRC3Q9H069 523 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms