RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 NKAIN1Q4KMZ8 207 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 WASHC2DQ5SRD0 308 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 C3orf62Q6ZUJ4 267 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 STRA8Q7Z7C7 330 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 PALM2Q8IXS6 379 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 OR4N4Q8N0Y3 316 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 MYO1HQ8N1T3 1032 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 MMGT1Q8N4V1 131 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 PPFIBP2Q8ND30 876 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 NACC2Q96BF6 587 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 LINGO1Q96FE5 620 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 ZFYVE21Q9BQ24 234 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 SELENOSQ9BQE4 189 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 LRRC1Q9BTT6 524 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 ACAT2Q9BWD1 397 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 SGPP1Q9BX95 441 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 SLC7A5P2Q9GIP4 190 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 PCBD2Q9H0N5 130 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 SLC26A1Q9H2B4 701 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 SYNPO2LQ9H987 977 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 POPDC3Q9HBV1 291 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 SAYSD1Q9NPB0 183 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 ZDHHC18Q9NUE0 388 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 TAC3Q9UHF0 121 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 SNX7Q9UNH6 387 aa12.64□□□□□ -0.39
SMAD3-213ENST00000560175 NOVA2Q9UNW9 492 aaKnown RBP12.64□□□□□ -0.39
SMAD3-213ENST00000560175 FAM95CA0A1B0GW59 222 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 A0A1B0GX78 115 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 CDC14CA4D256 554 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 CXorf49A8MYA2 514 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-213ENST00000560175 MED26O95402 600 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 ENO2P09104 434 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-213ENST00000560175 EZRP15311 586 aaKnown RBP12.63□□□□□ -0.39
SMAD3-213ENST00000560175 NPPBP16860 134 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 PPP1R3AQ16821 1122 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 AGTRAPQ6RW13 159 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 SBSNQ6UWP8 590 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 COX15Q7KZN9 410 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 OVCH1Q7RTY7 1134 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 GPATCH11Q8N954 259 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 OR56A3Q8NH54 315 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 FKBP10Q96AY3 582 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 VPS39Q96JC1 886 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 SARGQ9BW04 601 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 LRRC4CQ9HCJ2 640 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 MLXIPLQ9NP71 852 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 CUTCQ9NTM9 273 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 TXLNGQ9NUQ3 528 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 TMEM184CQ9NVA4 438 aa12.63□□□□□ -0.39
SMAD3-213ENST00000560175 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
SMAD3-213ENST00000560175 GCN1Q92616 2671 aaKnown RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 NUP210LQ5VU65 1888 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 A0A0J9YVX5 310 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 HYKKA2RU49 373 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 VSTM2BA6NLU5 285 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 C9J4A7 227 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 H0YGG7 62 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 KIF2AO00139 706 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 CEACAM4O75871 244 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 URI1O94763 535 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 SYF2O95926 243 aaKnown RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 CCND1P24385 295 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 MAGEA4P43358 317 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 VSX2P58304 361 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 ARF3P61204 181 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 POU4F1Q01851 419 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 COL9A2Q14055 689 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 C1orf189Q5VU69 101 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 TCTN3Q6NUS6 607 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 LCTLQ6UWM7 567 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 TTLL10Q6ZVT0 673 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 CEP97Q8IW35 865 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 NKAPQ8N5F7 415 aaKnown RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 OR4K1Q8NGD4 311 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 OR2Y1Q8NGV0 311 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 PTERQ96BW5 349 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 FBXL8Q96CD0 374 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 MVB12AQ96EY5 273 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 ABHD17AQ96GS6 310 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 IP6K3Q96PC2 410 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 GPR22Q99680 433 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 CPNE1Q99829 537 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 WDR54Q9H977 334 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 CCDC177Q9NQR7 707 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 CUEDC1Q9NWM3 386 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 IFT80Q9P2H3 777 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-213ENST00000560175 IKZF3Q9UKT9 509 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 PADI2Q9Y2J8 665 aa12.62□□□□□ -0.39
SMAD3-213ENST00000560175 SPENQ96T58 3664 aaKnown RBP12.61□□□□□ -0.39
SMAD3-213ENST00000560175 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 IGLV3-12A0A075B6K2 115 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 SUV39H1O43463 412 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 PIAS1O75925 651 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 UMODP07911 640 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 HIST1H2AGP0C0S8 130 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-213ENST00000560175 PIM1P11309 404 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-213ENST00000560175 HIST1H2ADP20671 130 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 ALAS2P22557 587 aa12.61□□□□□ -0.39
SMAD3-213ENST00000560175 TBPL1P62380 186 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms