RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MT-ND1P03886 318 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PIM1P11309 404 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 NCS1P62166 190 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PSPHP78330 225 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 AADACL2Q6P093 401 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 GSG1LQ6UXU4 331 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 IQCF1Q8N6M8 205 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 LCN9Q8WX39 176 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 GAD1Q99259 594 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 SAMD10Q9BYL1 202 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 MAGED1Q9Y5V3 778 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 LOC100130705A0A1B0GUX0 176 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 CTNNB1P35222 781 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 C1QTNF8P60827 252 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 NOXRED1Q6NXP6 359 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PSRC1Q6PGN9 363 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 Q8N402 240 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 GLYATL2Q8WU03 294 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC6A7Q99884 636 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 FTHL17Q9BXU8 183 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PPA2Q9H2U2 334 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 MED14O60244 1454 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PSMD10O75832 226 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 AGXTP21549 392 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 MLIPQ5VWP3 458 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM134Q9H6X4 195 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 FAM149AA5PLN7 773 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 DIRAS3O95661 229 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 MT-ND5P03915 603 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 S100A7P31151 101 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 LCP2Q13094 533 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM69Q5SWH9 247 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 STRADAQ7RTN6 431 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 NIPA1Q7RTP0 329 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 SRMSQ9H3Y6 488 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 XPNPEP2O43895 674 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 CLEC6AQ6EIG7 209 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 RHBDF2Q6PJF5 856 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 BEST3Q8N1M1 668 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 C7orf26Q96N11 449 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 ALPK1Q96QP1 1244 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 EBF3Q9H4W6 596 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 C9J4A7 227 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 SULT1C2O00338 296 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 SCAMP1O15126 338 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 PRKACAP17612 351 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 AMY2BP19961 511 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 DPP6P42658 865 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 CCR8P51685 355 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 VASH1Q7L8A9 365 aaPredicted RBP13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 NR4A3Q92570 626 aa13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 WDR55Q9H6Y2 383 aaPredicted RBP13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 AGO3Q9H9G7 860 aaKnown RBP13.52□□□□□ -0.24
CSPG4P12-202ENST00000559989 GJB6O95452 261 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZBTB48P10074 688 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 CD79BP40259 229 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 DPY19L1Q2PZI1 675 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMEM199Q8N511 208 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 KIAA0895Q8NCT3 520 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 CD180Q99467 661 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 ARMC1Q9NVT9 282 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC17A7Q9P2U7 560 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 TIMM22Q9Y584 194 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 PCDHB11Q9Y5F2 797 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 hCG_1818297A0A087WSY0 165 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR2AG2A6NM03 316 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 AHSA1O95433 338 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 HSPA7P48741 367 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 GLT8D1Q68CQ7 371 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC36A4Q6YBV0 504 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 CYP8B1Q9UNU6 501 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 CPS1P31327 1500 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 NPHS1O60500 1241 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 TPSB2P20231 275 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 MLLT3P42568 568 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 RNF4P78317 190 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 TPSAB1Q15661 275 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 HERC2P3Q9BVR0 1158 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 GBA3Q9H227 469 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 MTG2Q9H4K7 406 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A1W2PQ45 241 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A1W2PQY0 241 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 TTLL8A6PVC2 850 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 MAP2K7O14733 419 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 FGL2Q14314 439 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMCO2Q7Z6W1 182 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 GPR149Q86SP6 731 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 TRABD2AQ86V40 505 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 NLGN2Q8NFZ4 835 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 TWNKQ96RR1 684 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 NLGN3Q9NZ94 848 aa13.52□□□□□ -0.25
CSPG4P12-202ENST00000559989 A2ML1A8K2U0 1454 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 APOC3P02656 99 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 CHATP28329 748 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 ERVK-21P61565 698 aa13.51□□□□□ -0.25
CSPG4P12-202ENST00000559989 TUSC3Q13454 348 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms