RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 TRIM54Q9BYV2 358 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 CD244Q9BZW8 370 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 SPRY4Q9C004 299 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 MRPL46Q9H2W6 279 aaKnown RBP8.69□□□□□ -1.02
HMG20A-209ENST00000559728 TMBIM4Q9HC24 238 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 APMAPQ9HDC9 416 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 CCDC177Q9NQR7 707 aaPredicted RBP8.69□□□□□ -1.02
HMG20A-209ENST00000559728 ENAMQ9NRM1 1142 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 SATB2Q9UPW6 733 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 SLC22A14Q9Y267 594 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 MSRB2Q9Y3D2 182 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 LOXL2Q9Y4K0 774 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 NEUROG3Q9Y4Z2 214 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 AKAP13Q12802 2813 aa8.69□□□□□ -1.02
HMG20A-209ENST00000559728 CCDC187A0A096LP49 1063 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 A0A1B0GTL3 188 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 EFCAB7A8K855 629 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 A8MT66 165 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 B4E171 279 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 SUPT3HB4E1H0 165 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 C9orf172C9J069 976 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 TMX2-CTNND1H3BSU7 103 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 H7BY64 318 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 E2F3O00716 465 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 PLD2O14939 933 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 SPAG7O75391 227 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 SUPT3HO75486 399 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 RASSF9O75901 435 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 FKBP9O95302 570 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 TIAF1O95411 115 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ZBTB11O95625 1053 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-209ENST00000559728 CCNYL3P0C7X3 344 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 MSL3P1P0C860 447 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 CD22P20273 847 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 RPA3P35244 121 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-209ENST00000559728 TSPAN7P41732 249 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ALDH18A1P54886 795 aaKnown RBP8.68□□□□□ -1.02
HMG20A-209ENST00000559728 CSNK1G2P78368 415 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 HSD11B2P80365 405 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ABATP80404 500 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 NFKB2Q00653 900 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 MC2RQ01718 297 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 PCDH1Q08174 1060 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 PCBP2Q15366 365 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMG20A-209ENST00000559728 PFKFB4Q16877 469 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 C3orf38Q5JPI3 329 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 CATSPEREQ5SY80 951 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 DESI1Q6ICB0 168 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 CAPN13Q6MZZ7 669 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ARMC6Q6NXE6 501 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 FIGLAQ6QHK4 219 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 IGF2-ASQ6U949 168 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 LYPD8Q6UX82 237 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 RAB11FIP2Q7L804 512 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 FAM129CQ86XR2 697 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ARHGEF39Q8N4T4 335 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 RAB42Q8N4Z0 105 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 AGBL5Q8NDL9 886 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ABHD11Q8NFV4 315 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 WDR36Q8NI36 951 aaKnown RBP8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ATL1Q8WXF7 558 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 GATA6Q92908 595 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 NEIL2Q969S2 332 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ZUFSPQ96AP4 578 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ZNF501Q96CX3 271 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-209ENST00000559728 MED8Q96G25 268 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 APOPT1Q96IL0 206 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ZNF285Q96NJ3 590 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 PRAP1Q96NZ9 151 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 EGFL8Q99944 293 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 SH3GL2Q99962 352 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 PLCD4Q9BRC7 762 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 DPH7Q9BTV6 452 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 C1QTNF3Q9BXJ4 246 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ZBTB26Q9HCK0 441 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 ASCL3Q9NQ33 180 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 CD274Q9NZQ7 290 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 SLC17A7Q9P2U7 560 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 DCDC2Q9UHG0 476 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 PLLPQ9Y342 182 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 PCDHGA8Q9Y5G5 932 aa8.68□□□□□ -1.02
HMG20A-209ENST00000559728 TRABD2BA6NFA1 517 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 ZNF839A8K0R7 811 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 SYCE1LA8MT33 242 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 CDRT15L2A8MXV6 281 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 E7EQ34 232 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 STX16-NPEPL1H3BU86 382 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 PPP6CO00743 305 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 STX16O14662 325 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 HAT1O14929 419 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 RGS16O15492 202 aaPredicted RBP8.67□□□□□ -1.02
HMG20A-209ENST00000559728 LCMT2O60294 686 aaKnown RBP8.67□□□□□ -1.02
HMG20A-209ENST00000559728 GLRA3O75311 464 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 STK16O75716 305 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 WDR47O94967 919 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 MED26O95402 600 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 RPS17P08708 135 aaKnown RBP8.67□□□□□ -1.02
HMG20A-209ENST00000559728 FGF5P12034 268 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 CDH1P12830 882 aa8.67□□□□□ -1.02
HMG20A-209ENST00000559728 CCND1P24385 295 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms