RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 TSTA3Q13630 321 aaPredicted RBP16.82■□□□□ 0.28
SMAD3-210ENST00000559092 MUM1Q2TAK8 710 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 PRTGQ2VWP7 1150 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 PAQR3Q6TCH7 311 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 CFAP36Q96G28 342 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 PWWP2AQ96N64 755 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 KRT12Q99456 494 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 TRIM51Q9BSJ1 452 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 TRIM4Q9C037 500 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 CHMP2BQ9UQN3 213 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 VWA7Q9Y334 891 aa16.82■□□□□ 0.28
SMAD3-210ENST00000559092 MYO18BQ8IUG5 2567 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 FAM187AA6NFU0 413 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 E7ESA3 106 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 H0YGG7 62 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 TXNDC9O14530 226 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 PDGFAP04085 211 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 EIF2S1P05198 315 aaKnown RBP16.81■□□□□ 0.28
SMAD3-210ENST00000559092 NR1D1P20393 614 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 MMP11P24347 488 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 IMPA1P29218 277 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 IL2P60568 153 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 ARF3P61204 181 aaPredicted RBP16.81■□□□□ 0.28
SMAD3-210ENST00000559092 ILF2Q12905 390 aaKnown RBP16.81■□□□□ 0.28
SMAD3-210ENST00000559092 SLC9A5Q14940 896 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 NKG7Q16617 165 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 DCAF10Q5QP82 559 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 HP1BP3Q5SSJ5 553 aaPredicted RBP16.81■□□□□ 0.28
SMAD3-210ENST00000559092 THEMIS2Q5TEJ8 643 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 GARNL3Q5VVW2 1013 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 MAATS1Q7Z4T9 603 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 MYO1HQ8N1T3 1032 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 PPFIBP2Q8ND30 876 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 MVB12AQ96EY5 273 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 OR2A5Q96R48 311 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 WDR83Q9BRX9 315 aaKnown RBP16.81■□□□□ 0.28
SMAD3-210ENST00000559092 ZNF304Q9HCX3 659 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 P4HTMQ9NXG6 502 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 MOCS1Q9NZB8 636 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 CDC14AQ9UNH5 594 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 PDE10AQ9Y233 779 aa16.81■□□□□ 0.28
SMAD3-210ENST00000559092 VSTM2BA6NLU5 285 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 NRP2O60462 931 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 HIST1H2AGP0C0S8 130 aaPredicted RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 HIST1H2ADP20671 130 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 CCND1P24385 295 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 RPL21P46778 160 aaKnown RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 SOX8P57073 446 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 PDAP1Q13442 181 aaKnown RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 RBM20Q5T481 1227 aaKnown RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 HECTD2Q5U5R9 776 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 TRMT10BQ6PF06 316 aaKnown RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 COX15Q7KZN9 410 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 PPP1R32Q7Z5V6 425 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 CSNK1A1LQ8N752 337 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 CLEC1AQ8NC01 280 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 SPATA4Q8NEY3 305 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 FDCSPQ8NFU4 85 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 RERGQ96A58 199 aaPredicted RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 HIST1H2AHQ96KK5 128 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 SMAD5Q99717 465 aaKnown RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 HIST1H2AJQ99878 128 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 ERP44Q9BS26 406 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 H2AFJQ9BTM1 129 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 TRIM31Q9BZY9 425 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 CCDC177Q9NQR7 707 aaPredicted RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 TMEM184CQ9NVA4 438 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 GPR83Q9NYM4 423 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 C5AR2Q9P296 337 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 STOX2Q9P2F5 926 aaPredicted RBP16.8■□□□□ 0.28
SMAD3-210ENST00000559092 ADAMTS6Q9UKP5 1117 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 SNX24Q9Y343 169 aa16.8■□□□□ 0.28
SMAD3-210ENST00000559092 UBR5O95071 2799 aaPredicted RBP16.79■□□□□ 0.28
SMAD3-210ENST00000559092 FLNBO75369 2602 aaKnown RBP16.79■□□□□ 0.28
SMAD3-210ENST00000559092 KCNE1BA0A087WTH5 132 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 PYCARD-AS1I3L0S3 204 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 AGPSO00116 658 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 PRPF4O43172 522 aaKnown RBP eCLIP16.79■□□□□ 0.282e-7■■■■□ 20.5
SMAD3-210ENST00000559092 TSPAN12O95859 305 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 FDXRP22570 491 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 OR1D4P47884 311 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 ETF1P62495 437 aaKnown RBP16.79■□□□□ 0.28
SMAD3-210ENST00000559092 FOXK1P85037 733 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 MGAT5Q09328 741 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 PDIA2Q13087 525 aaKnown RBP16.79■□□□□ 0.28
SMAD3-210ENST00000559092 FAM45BPQ6NSW5 357 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 SPNS2Q8IVW8 549 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 GPATCH11Q8N954 259 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 FAM45AQ8TCE6 357 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.79■□□□□ 0.28
SMAD3-210ENST00000559092 COL26A1Q96A83 441 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 LINGO1Q96FE5 620 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 PDLIM5Q96HC4 596 aaKnown RBP16.79■□□□□ 0.28
SMAD3-210ENST00000559092 VPS50Q96JG6 964 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 SPSB2Q99619 263 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 ATP13A2Q9NQ11 1180 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 SEMA3GQ9NS98 782 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 WHRNQ9P202 907 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 ZFATQ9P243 1243 aa16.79■□□□□ 0.28
SMAD3-210ENST00000559092 A6NL46 340 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms