RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ZBTB14O43829 449 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 PSIP1O75475 530 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 USP1O94782 785 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 ANXA5P08758 320 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 MYBL2P10244 700 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 FDXRP22570 491 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 CXCR5P32302 372 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 MAGEA6P43360 314 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 TSFMP43897 325 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 PNLIPRP1P54315 467 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 EMP2P54851 167 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 ARF3P61204 181 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 ABATP80404 500 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 PRDX1Q06830 199 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 DHX34Q14147 1143 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 GBX1Q14549 363 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 ZNF169Q14929 603 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 TRIP13Q15645 432 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 HIF1AQ16665 826 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 ACSBG2Q5FVE4 666 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 GARNL3Q5VVW2 1013 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 NDUFAF7Q7L592 441 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 LMNTD2Q8IXW0 634 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 CSNK1A1LQ8N752 337 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 GABPB2Q8TAK5 448 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 FAM136AQ96C01 138 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 NAP1L3Q99457 506 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 PLCD4Q9BRC7 762 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 TRPC4Q9UBN4 977 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 TSR3Q9UJK0 312 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 COMMD10Q9Y6G5 202 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 NSG1A0A0A6YYJ2 146 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 DYTNA2CJ06 578 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ARHGEF33A8MVX0 844 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 AVILO75366 819 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 KRT14P02533 472 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ERGP11308 486 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ICAM2P13598 275 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ENO3P13929 434 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 EZRP15311 586 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 VPS41P49754 854 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 PER3P56645 1201 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 MFAP5Q13361 173 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 DSG2Q14126 1118 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 FASTKQ14296 549 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 KCNJ11Q14654 390 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 PRTGQ2VWP7 1150 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 THEMIS2Q5TEJ8 643 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ICE2Q659A1 982 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ATG9BQ674R7 924 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ZNF470Q6ECI4 717 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 SUSD1Q6UWL2 747 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 CENPUQ71F23 418 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 PRSS58Q8IYP2 241 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 PRELID2Q8N945 189 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 FBXO15Q8NCQ5 510 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ST6GALNAC3Q8NDV1 305 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 CALML6Q8TD86 181 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 INPP5DQ92835 1189 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 MAGOHBQ96A72 148 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 CNDP1Q96KN2 507 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 ZNF160Q9HCG1 818 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 MKKSQ9NPJ1 570 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 C14orf105Q9NVL8 296 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 NOVA2Q9UNW9 492 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 CENPEQ02224 2701 aa12.97□□□□□ -0.33
SNRPA1-204ENST00000558020 IGLV3-12A0A075B6K2 115 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 TCRBV7S3A2A0A539 114 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 A1L4Q6 167 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 IDSB3KWA1 339 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 ALOX12BO75342 701 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 SLC16A8O95907 504 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 SYF2O95926 243 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 HEXBP07686 556 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 UQCRHP07919 91 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 HRH2P25021 359 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 CLCN7P51798 805 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 TERF1P54274 439 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 NDUFA9Q16795 377 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 VWA2Q5GFL6 755 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 LINC00696Q6ZRV3 163 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 ADCK2Q7Z695 626 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 CAND1Q86VP6 1230 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 KCNMB4Q86W47 210 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 PAQR7Q86WK9 346 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 TMEM151BQ8IW70 566 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 REXO1L1PQ8IX06 675 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 MCUQ8NE86 351 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 FAR1Q8WVX9 515 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 ASB11Q8WXH4 323 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 KCNJ9Q92806 393 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 MMABQ96EY8 250 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 PBKQ96KB5 322 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 PKP4Q99569 1192 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 TGIF2Q9GZN2 237 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 DRC3Q9H069 523 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 TAC3Q9UHF0 121 aa12.96□□□□□ -0.33
SNRPA1-204ENST00000558020 ERRFI1Q9UJM3 462 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms