RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PDK4Q16654 411 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 KIF26BQ2KJY2 2108 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 PRAMEF9Q5VWM5 478 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 ADCK2Q7Z695 626 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 RDH11Q8TC12 318 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 SLC5A11Q8WWX8 675 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 SLC41A2Q96JW4 573 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 PKNOX2Q96KN3 472 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 FCRL4Q96PJ5 515 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 SELENOSQ9BQE4 189 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 ERVK-6Q9BXR3 956 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 OXSMQ9NWU1 459 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 PCTPQ9UKL6 214 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 TMCO1Q9UM00 188 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 TNPO3Q9Y5L0 923 aaKnown RBP14.69□□□□□ -0.06
NEDD1-213ENST00000557644 FREM2Q5SZK8 3169 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 HGFP14210 728 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 NELFEP18615 380 aaKnown RBP14.68□□□□□ -0.06
NEDD1-213ENST00000557644 TSPAN8P19075 237 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 ALDH3A1P30838 453 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 CDH13P55290 713 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 ABATP80404 500 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 TRA2AQ13595 282 aaKnown RBP eCLIP14.68□□□□□ -0.06
NEDD1-213ENST00000557644 UNC50Q53HI1 259 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 ZNF678Q5SXM1 525 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 TMPRSS7Q7RTY8 843 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 GOLGA7Q7Z5G4 137 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 TMPRSS11BQ86T26 416 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 PLD3Q8IV08 490 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 MGARPQ8TDB4 240 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 ZBTB26Q9HCK0 441 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 OCIAD1Q9NX40 245 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 DYRK1BQ9Y463 629 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 HMGB1P1B2RPK0 211 aaPredicted RBP14.68□□□□□ -0.06
NEDD1-213ENST00000557644 PPP6CO00743 305 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 TM9SF1O15321 606 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 CTSVO60911 334 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 CCNDBP1O95273 360 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 RPS17P08708 135 aaKnown RBP14.68□□□□□ -0.06
NEDD1-213ENST00000557644 EBLN1P0CF75 366 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 FOLR1P15328 257 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 IMPDH1P20839 514 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 HSD11B2P80365 405 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 FOXC1Q12948 553 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 GTF2H2Q13888 395 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 DEFB110Q30KQ9 67 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 ZNF425Q6IV72 752 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 GTF2H2CQ6P1K8 395 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 DGLUCYQ7Z3D6 616 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 FAM129CQ86XR2 697 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 SLC22A9Q8IVM8 553 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 PLCD4Q9BRC7 762 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 SPNS1Q9H2V7 528 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 SYNPO2LQ9H987 977 aa14.68□□□□□ -0.06
NEDD1-213ENST00000557644 WDR91A4D1P6 747 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 ATP8B1O43520 1251 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 SUPT7LO94864 414 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 ZWINTO95229 277 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 CCL4P13236 92 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 EPB42P16452 691 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 GNAZP19086 355 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 SPINK2P20155 84 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 VARSP26640 1264 aaKnown RBP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 CSTF2P33240 577 aaKnown RBP eCLIP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 ARL4DP49703 201 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 NAGLUP54802 743 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 COL9A2Q14055 689 aaPredicted RBP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 FAM219BQ5XKK7 198 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 CARFQ8N187 725 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 D2HGDHQ8N465 521 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 CCNYL1Q8N7R7 359 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 ZUFSPQ96AP4 578 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 STRADBQ9C0K7 418 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 SEMA4BQ9NPR2 832 aaPredicted RBP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 ANGPTL3Q9Y5C1 460 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 KLK4Q9Y5K2 254 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 A0A1B0GTL3 188 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 FEZF1A0PJY2 475 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 OR2A25A4D2G3 310 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 HAT1O14929 419 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 HGSO14964 777 aaPredicted RBP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 CTSBP07858 339 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 ITIH1P19827 911 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 MLLT3P42568 568 aaPredicted RBP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 CCR10P46092 362 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 SERPINB4P48594 390 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 WDR4P57081 412 aaKnown RBP14.67□□□□□ -0.06
NEDD1-213ENST00000557644 CSNK1G2P78368 415 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 LIPMQ5VYY2 423 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 SLCO4C1Q6ZQN7 724 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 PAQR7Q86WK9 346 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 GALNT15Q8N3T1 639 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 AGBL5Q8NDL9 886 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 ZNF740Q8NDX6 193 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 ABHD11Q8NFV4 315 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 OR52B6Q8NGF0 335 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 MDM1Q8TC05 714 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 L3HYPDHQ96EM0 354 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 TCTN2Q96GX1 697 aa14.67□□□□□ -0.06
NEDD1-213ENST00000557644 PRR11Q96HE9 360 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms