RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RNF220Q5VTB9 566 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 BBS12Q6ZW61 710 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CXCR6O00574 342 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 IDSP22304 550 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CDC25CP30307 473 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 NOMO3P69849 1222 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 NOMO1Q15155 1222 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 KRBOX4Q5JUW0 171 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CCNJQ5T5M9 372 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ZBTB2Q8N680 514 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TCEANCQ8N8B7 351 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MYRFLQ96LU7 910 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 DNTTIP1Q9H147 329 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TCEAL2Q9H3H9 227 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 SRA1Q9HD15 236 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 E7EQ34 232 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 OR2B3O76000 313 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CDH12P55289 794 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 OR12D2P58182 307 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CHAF1BQ13112 559 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 GSG1LQ6UXU4 331 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FBXO33Q7Z6M2 555 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 LPGAT1Q92604 370 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 LDAHQ9H6V9 325 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 EXOSC1Q9Y3B2 195 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 SHROOM3Q8TF72 1996 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ANGPTL7O43827 346 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MZT1Q08AG7 82 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MAMLD1Q13495 774 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 GK3PQ14409 553 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TTLL10Q6ZVT0 673 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TRIB2Q92519 343 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TIGARQ9NQ88 270 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ENDOD1O94919 500 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ACTR1AP61163 376 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MLLT1Q03111 559 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 NAE1Q13564 534 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 GTF2H2Q13888 395 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 EXOSC6Q5RKV6 272 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FAM171A1Q5VUB5 890 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 OGFOD2Q6N063 350 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 GTF2H2CQ6P1K8 395 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF619Q8N2I2 560 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 SLC44A5Q8NCS7 719 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MSI2Q96DH6 328 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FERD3LQ96RJ6 166 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF286AQ9HBT8 521 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MSRAQ9UJ68 235 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 RPP40O75818 363 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CD3GP09693 182 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PORP16435 677 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CHATP28329 748 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CAMLGP49069 296 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 SCRN2Q96FV2 425 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FAM205AQ6ZU69 1335 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 SETD1AO15047 1707 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PSMD9O00233 223 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PKMP14618 531 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 BMP6P22004 513 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 EDNRAP25101 427 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM41BQ5BJD5 291 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ATAT1Q5SQI0 421 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 NXPE1Q8N323 547 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PSD4Q8NDX1 1056 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PTPRHQ9HD43 1115 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 EIF2B3Q9NR50 452 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FBXO6Q9NRD1 293 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 LRRC7Q96NW7 1537 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PHYHO14832 338 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PAHP00439 452 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PIGRP01833 764 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 THBS2P35442 1172 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CHIT1Q13231 466 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF574Q6ZN55 896 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 REM2Q8IYK8 340 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 DNAJC22Q8N4W6 341 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PIWIL1Q96J94 861 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF668Q96K58 619 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ORAI3Q9BRQ5 295 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 GNG8Q9UK08 70 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CRB1P82279 1406 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PRKACAP17612 351 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 RPS3P23396 243 aaKnown RBP eCLIP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 MAGEA11P43364 429 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 PFKPQ01813 784 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 LRRC66Q68CR7 880 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 BEND4Q6ZU67 534 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CARM1Q86X55 608 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CMIPQ8IY22 773 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 RBM15BQ8NDT2 890 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 FAM151AQ8WW52 585 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 UPRTQ96BW1 309 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 BIRC8Q96P09 236 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ACTRT3Q9BYD9 372 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 KIAA1522Q9P206 1035 aaPredicted RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 ACKR2O00590 384 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 KHNYNO15037 678 aaKnown RBP8.63□□□□□ -1.03
SYNE3-205ENST00000557275 CLDN11O75508 207 aa8.63□□□□□ -1.03
SYNE3-205ENST00000557275 TRUB2O95900 331 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms