RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 UTP6Q9NYH9 597 aaKnown RBP15.15■□□□□ 0.02
TUBB3-213ENST00000557262 NOVA2Q9UNW9 492 aaKnown RBP15.15■□□□□ 0.02
TUBB3-213ENST00000557262 CSAG2Q9Y5P2 127 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 TEX15Q9BXT5 2789 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 IGLV3-12A0A075B6K2 115 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 FAM237BA0A1B0GVD1 139 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 A1L4Q6 167 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 SDR42E2A6NKP2 422 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 ZNF839A8K0R7 811 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 MYO1CO00159 1063 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 VPS26AO75436 327 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 HPP00738 406 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 LDLRP01130 860 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 KRT14P02533 472 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 CATP04040 527 aaKnown RBP15.14■□□□□ 0.01
TUBB3-213ENST00000557262 ACPPP15309 386 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 FBLP22087 321 aaKnown RBP15.14■□□□□ 0.01
TUBB3-213ENST00000557262 TSFMP43897 325 aaKnown RBP15.14■□□□□ 0.01
TUBB3-213ENST00000557262 VPS41P49754 854 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 PNLIPRP1P54315 467 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 PRDX1Q06830 199 aaKnown RBP15.14■□□□□ 0.01
TUBB3-213ENST00000557262 TSTA3Q13630 321 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-213ENST00000557262 VWA2Q5GFL6 755 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 ISLR2Q6UXK2 745 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 LAPTM4BQ86VI4 370 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 CAND1Q86VP6 1230 aaKnown RBP15.14■□□□□ 0.01
TUBB3-213ENST00000557262 KCNMB4Q86W47 210 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 REXO1L1PQ8IX06 675 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 PRSS58Q8IYP2 241 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 ST6GALNAC3Q8NDV1 305 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 MVB12AQ96EY5 273 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 CABS1Q96KC9 395 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 C10orf90Q96M02 699 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 C5orf34Q96MH7 638 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 SAMD15Q9P1V8 674 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 KLHL42Q9P2K6 505 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 C3orf18Q9UK00 162 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 PCM1Q15154 2024 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 DOCK10Q96BY6 2186 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 NOTCH2Q04721 2471 aa15.14■□□□□ 0.01
TUBB3-213ENST00000557262 CTAGE9A4FU28 777 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 MAP2K7O14733 419 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 PRPF4O43172 522 aaKnown RBP eCLIP15.13■□□□□ 0.013e-7■■■□□ 16.7
TUBB3-213ENST00000557262 USP1O94782 785 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 KLHL18O94889 574 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 CCNDBP1O95273 360 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 MLNP12872 115 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 CLCN7P51798 805 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 EMP2P54851 167 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 RELAQ04206 551 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 THOC5Q13769 683 aaKnown RBP15.13■□□□□ 0.01
TUBB3-213ENST00000557262 DHX34Q14147 1143 aaKnown RBP15.13■□□□□ 0.01
TUBB3-213ENST00000557262 ZNF169Q14929 603 aaPredicted RBP15.13■□□□□ 0.01
TUBB3-213ENST00000557262 TLR1Q15399 786 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 TTLL9Q3SXZ7 439 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 NUP210LQ5VU65 1888 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 ANKRD22Q5VYY1 191 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 ICE2Q659A1 982 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 B3GNTL1Q67FW5 361 aaPredicted RBP15.13■□□□□ 0.01
TUBB3-213ENST00000557262 NDUFAF7Q7L592 441 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 MAMDC2Q7Z304 686 aaPredicted RBP15.13■□□□□ 0.01
TUBB3-213ENST00000557262 PAQR7Q86WK9 346 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 FBXO15Q8NCQ5 510 aaPredicted RBP15.13■□□□□ 0.01
TUBB3-213ENST00000557262 CNDP1Q96KN2 507 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 OR2A5Q96R48 311 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 MESP1Q9BRJ9 268 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 YIPF2Q9BWQ6 316 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 ZNF160Q9HCG1 818 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 TRPC4Q9UBN4 977 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 TAC3Q9UHF0 121 aa15.13■□□□□ 0.01
TUBB3-213ENST00000557262 RUVBL1Q9Y265 456 aaKnown RBP15.13■□□□□ 0.01
TUBB3-213ENST00000557262 MDC1Q14676 2089 aaKnown RBP15.12■□□□□ 0.01
TUBB3-213ENST00000557262 UNC79Q9P2D8 2635 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 IGKV1-8A0A0C4DH67 115 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 E7ENX8 843 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 TXNDC9O14530 226 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 ZBTB14O43829 449 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 SLC16A8O95907 504 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 MPC1LP0DKB6 136 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 CXCR2P25025 360 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 ABATP80404 500 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 TAP2Q03519 686 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 CDC16Q13042 620 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 MFAP5Q13361 173 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 CTBP1Q13363 440 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 DSG2Q14126 1118 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 GARNL3Q5VVW2 1013 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 ZNF470Q6ECI4 717 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 ZNF425Q6IV72 752 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 CYHR1Q6ZMK1 362 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 LINC00696Q6ZRV3 163 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 LRRC8AQ8IWT6 810 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 KBTBD2Q8IY47 623 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 CSNK1A1LQ8N752 337 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 MCUQ8NE86 351 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 GRHL3Q8TE85 626 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 ZNF480Q8WV37 535 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 FAR1Q8WVX9 515 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 ASB11Q8WXH4 323 aa15.12■□□□□ 0.01
TUBB3-213ENST00000557262 MAGOHBQ96A72 148 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms