RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 FAM214AQ32MH5 1076 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 P3H1Q32P28 736 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 SYTL3Q4VX76 610 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 ARHGEF18Q6ZSZ5 1173 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 LINC00523Q86TU6 105 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 MCATQ8IVS2 390 aaKnown RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 DNAJB14Q8TBM8 379 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 CCDC110Q8TBZ0 833 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 MRFAP1L1Q96HT8 127 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 NRTNQ99748 197 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 TRIM56Q9BRZ2 755 aaKnown RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 TSSK1BQ9BXA7 367 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 RBCK1Q9BYM8 510 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 GOLPH3Q9H4A6 298 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 C10orf88Q9H8K7 445 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 ZBTB20Q9HC78 741 aaPredicted RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 SLC6A20Q9NP91 592 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 IRAK4Q9NWZ3 460 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 CDC23Q9UJX2 597 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 FBXL4Q9UKA2 621 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 NTNG1Q9Y2I2 539 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 TDRKHQ9Y2W6 561 aaKnown RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 PCDHA13Q9Y5I0 950 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 KLK4Q9Y5K2 254 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 MRFAP1Q9Y605 127 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 SNRNP200O75643 2136 aaKnown RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 FBN2P35556 2912 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 CCDC78A2IDD5 438 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 GOLGA6L9A6NEM1 432 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 VSTM2BA6NLU5 285 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 ERI2A8K979 691 aaKnown RBP8.29□□□□□ -1.08
VRK1-206ENST00000557222 BTNL10A8MVZ5 291 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 CCL22O00626 93 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 E2F3O00716 465 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 PCDH17O14917 1159 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 LRRTM2O43300 516 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 GPC4O75487 556 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 MED26O95402 600 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 DRD2P14416 443 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 FDXRP22570 491 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 MSNP26038 577 aaKnown RBP8.29□□□□□ -1.08
VRK1-206ENST00000557222 ELAVL4P26378 380 aaKnown RBP8.29□□□□□ -1.08
VRK1-206ENST00000557222 PEBP1P30086 187 aaKnown RBP8.29□□□□□ -1.08
VRK1-206ENST00000557222 FOXN2P32314 431 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 CYLC1P35663 651 aaPredicted RBP8.29□□□□□ -1.08
VRK1-206ENST00000557222 SPARCL1Q14515 664 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 SLC9A5Q14940 896 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 NAA25Q14CX7 972 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 INAQ16352 499 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 DEFB110Q30KQ9 67 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 TUBB8Q3ZCM7 444 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 KIRREL2Q6UWL6 708 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 ISLR2Q6UXK2 745 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 UNC5DQ6UXZ4 953 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 TTLL10Q6ZVT0 673 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 NLRP9Q7RTR0 991 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 DCUN1D3Q8IWE4 304 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 SLC22A15Q8IZD6 547 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 BCORP1Q8N888 145 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 OR2L8Q8NGY9 312 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 GRHL3Q8TE85 626 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 ASZ1Q8WWH4 475 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 PEX13Q92968 403 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 RELTQ969Z4 430 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 ALKBH8Q96BT7 664 aaKnown RBP8.29□□□□□ -1.08
VRK1-206ENST00000557222 MOCOSQ96EN8 888 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 DMRTB1Q96MA1 342 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 SLX1AQ9BQ83 275 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 MENTQ9BUN1 341 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 CARD6Q9BX69 1037 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 RAB11FIP5Q9BXF6 653 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 CUTCQ9NTM9 273 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 HS3ST3B1Q9Y662 390 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 PRSS21Q9Y6M0 314 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 NUP210LQ5VU65 1888 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 MYO7BQ6PIF6 2116 aa8.29□□□□□ -1.08
VRK1-206ENST00000557222 C2CD3Q4AC94 2353 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 PKDREJQ9NTG1 2253 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 DCHS2Q6V1P9 2916 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 A0A1W2PQ72 361 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 MACROD2A1Z1Q3 448 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 USP1O94782 785 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 SLCO2B1O94956 709 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 GAS8O95995 478 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 B3GALT4O96024 378 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 HPP00738 406 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 CTSBP07858 339 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 PRSS56P0CW18 603 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 TPH1P17752 444 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 MAGP20916 626 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 CD9P21926 228 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 STIP1P31948 543 aaKnown RBP8.28□□□□□ -1.08
VRK1-206ENST00000557222 ACVR1Q04771 509 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 CDH17Q12864 832 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 CDC16Q13042 620 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 MFAP5Q13361 173 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 ART3Q13508 389 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 POU6F1Q14863 301 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 RBBP7Q16576 425 aa8.28□□□□□ -1.08
VRK1-206ENST00000557222 PRMT9Q6P2P2 845 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms