RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SDE2Q6IQ49 451 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 RNF111Q6ZNA4 994 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 C11orf96Q7Z7L8 435 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 DHDDSQ86SQ9 333 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 THOC6Q86W42 341 aaKnown RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 RALGPS2Q86X27 583 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 CFAP206Q8IYR0 622 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 CHPFQ8IZ52 775 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 TDHQ8IZJ6 230 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 OXR1Q8N573 874 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 AADATQ8N5Z0 425 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ZNF513Q8N8E2 541 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 DCBLD1Q8N8Z6 715 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 CSGALNACT1Q8TDX6 532 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 SETD7Q8WTS6 366 aaKnown RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 PYDC1Q8WXC3 89 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 DNAJC9Q8WXX5 260 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 CMTM7Q96FZ5 175 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 FRG2BQ96QU4 278 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 PKP4Q99569 1192 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ZBTB18Q99592 522 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 SGPP1Q9BX95 441 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 OR2AG1Q9H205 316 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 EHD1Q9H4M9 534 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ELOVL6Q9H5J4 265 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 ITM2CQ9NQX7 267 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 NMRK1Q9NWW6 199 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 SCML1Q9UN30 329 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 AP3M1Q9Y2T2 418 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 COQ6Q9Y2Z9 468 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 TSC22D4Q9Y3Q8 395 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 PCDHA9Q9Y5H5 950 aa8.04□□□□□ -1.12
ATXN3-235ENST00000556082 MKI67P46013 3256 aaKnown RBP8.04□□□□□ -1.12
ATXN3-235ENST00000556082 COL4A3Q01955 1670 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PRSS51A0A1B0GVH4 220 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 TCRBV3S1A0A5B6 114 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 IGLON5A6NGN9 336 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 AQP12BA6NM10 295 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PLK4O00444 970 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 FFAR3O14843 346 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 TM4SF5O14894 197 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 CLGNO14967 610 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 MID1O15344 667 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 GPR42O15529 346 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PRAMEF4O60810 478 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 SEC22BO75396 215 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PDYNP01213 254 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 IGLV1-40P01703 118 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 IL6P05231 212 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 HOXC4P09017 264 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 GLULP15104 373 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 IMPA1P29218 277 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PDHA2P29803 388 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 NTSR1P30989 418 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PREPP48147 710 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 SLC7A2P52569 658 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 NME5P56597 212 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 RPS21P63220 83 aaKnown RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 CDK3Q00526 305 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 IRF8Q02556 426 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 CHIT1Q13231 466 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 NAE1Q13564 534 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PWP1Q13610 501 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 ARHGAP19Q14CB8 494 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 CPSF6Q16630 551 aaKnown RBP eCLIP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 IMPG1Q17R60 797 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 WSCD2Q2TBF2 565 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 USP39Q53GS9 565 aaKnown RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 TMEM196Q5HYL7 178 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PRAMEF9Q5VWM5 478 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 METRNLQ641Q3 311 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 GRHL2Q6ISB3 625 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 KIAA1161Q6NSJ0 714 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 DLEU7Q6UYE1 221 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 MSANTD1Q6ZTZ1 278 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 TRMT11Q7Z4G4 463 aaKnown RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 ZNF438Q7Z4V0 828 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 AMZ2Q86W34 360 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PTRH1Q86Y79 214 aaKnown RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 TRAPPC5Q8IUR0 188 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 HID1Q8IV36 788 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 AQP12AQ8IXF9 295 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 LRRC56Q8IYG6 542 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 PQLC1Q8N2U9 271 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 HDDC3Q8N4P3 179 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 SMRP1Q8NCR6 262 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 ST13P5Q8NFI4 369 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 OR9A1PQ8NGU1 263 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 WDR20Q8TBZ3 569 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 SELENOMQ8WWX9 145 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 EZH1Q92800 747 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 TMEM125Q96AQ2 219 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 NAF1Q96HR8 494 aaKnown RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 ABHD8Q96I13 439 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 RSRC1Q96IZ7 334 aaKnown RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 HHIPQ96QV1 700 aa8.03□□□□□ -1.12
ATXN3-235ENST00000556082 UBL7Q96S82 380 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 UHRF1Q96T88 793 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-235ENST00000556082 C1orf50Q9BV19 199 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms