RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 EIF3FO00303 357 aaPredicted RBP23.35■■□□□ 1.33
PRKCH-216ENST00000555542 KLHL41O60662 606 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 MMP11P24347 488 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 CARSP49589 748 aaKnown RBP23.35■■□□□ 1.33
PRKCH-216ENST00000555542 ARF3P61204 181 aaPredicted RBP23.35■■□□□ 1.33
PRKCH-216ENST00000555542 TAP2Q03519 686 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 OCA2Q04671 838 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 MSS51Q4VC12 460 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 HP1BP3Q5SSJ5 553 aaPredicted RBP23.35■■□□□ 1.33
PRKCH-216ENST00000555542 PRMT9Q6P2P2 845 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 FBXO42Q6P3S6 717 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 TMEM151BQ8IW70 566 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 DTWD1Q8N5C7 304 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 CSNK1A1LQ8N752 337 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 CPT1CQ8TCG5 803 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 CERS2Q96G23 380 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 SMAD5Q99717 465 aaKnown RBP23.35■■□□□ 1.33
PRKCH-216ENST00000555542 SLC26A1Q9H2B4 701 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 ATP13A2Q9NQ11 1180 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 ENAMQ9NRM1 1142 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 LUZP4Q9P127 313 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 STOX2Q9P2F5 926 aaPredicted RBP23.35■■□□□ 1.33
PRKCH-216ENST00000555542 MAP10Q9P2G4 905 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 ANKRD12Q6UB98 2062 aa23.35■■□□□ 1.33
PRKCH-216ENST00000555542 VPS4BO75351 444 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 ONECUT2O95948 504 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 FBLP22087 321 aaKnown RBP23.34■■□□□ 1.33
PRKCH-216ENST00000555542 PAFAH1B1P43034 410 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 ABATP80404 500 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 MYBPC3Q14896 1274 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 MORF4L2Q15014 288 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 RBBP7Q16576 425 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 CYHR1Q6ZMK1 362 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 PAQR7Q86WK9 346 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 MYO1HQ8N1T3 1032 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 MCOLN3Q8TDD5 553 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 NACC2Q96BF6 587 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 VPS50Q96JG6 964 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 SPSB2Q99619 263 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 YIPF2Q9BWQ6 316 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 FBXL4Q9UKA2 621 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 VPS4AQ9UN37 437 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 CHMP2BQ9UQN3 213 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 NUP210LQ5VU65 1888 aa23.34■■□□□ 1.33
PRKCH-216ENST00000555542 PABPN1LA6NDY0 278 aaKnown RBP23.33■■□□□ 1.33
PRKCH-216ENST00000555542 MASP2O00187 686 aa23.33■■□□□ 1.33
PRKCH-216ENST00000555542 EZRP15311 586 aaKnown RBP23.33■■□□□ 1.33
PRKCH-216ENST00000555542 ITGA3P26006 1051 aa23.33■■□□□ 1.33
PRKCH-216ENST00000555542 SKIV2L2P42285 1042 aaKnown RBP23.33■■□□□ 1.33
PRKCH-216ENST00000555542 IRAK1BP1Q5VVH5 260 aa23.33■■□□□ 1.33
PRKCH-216ENST00000555542 JMJD6Q6NYC1 403 aaPredicted RBP23.33■■□□□ 1.33
PRKCH-216ENST00000555542 PRSS58Q8IYP2 241 aa23.33■■□□□ 1.33
PRKCH-216ENST00000555542 EEF1AKMT1Q8WVE0 214 aa23.33■■□□□ 1.33
PRKCH-216ENST00000555542 CRB3Q9BUF7 120 aa23.33■■□□□ 1.33
PRKCH-216ENST00000555542 CCDC177Q9NQR7 707 aaPredicted RBP23.33■■□□□ 1.33
PRKCH-216ENST00000555542 C5AR2Q9P296 337 aa23.33■■□□□ 1.33
PRKCH-216ENST00000555542 ZNF282Q9UDV7 671 aaPredicted RBP23.33■■□□□ 1.33
PRKCH-216ENST00000555542 CDC14AQ9UNH5 594 aa23.33■■□□□ 1.33
PRKCH-216ENST00000555542 IGKV1-8A0A0C4DH67 115 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 PRPF4O43172 522 aaKnown RBP eCLIP23.32■■□□□ 1.32
PRKCH-216ENST00000555542 IPO13O94829 963 aaKnown RBP23.32■■□□□ 1.32
PRKCH-216ENST00000555542 MED26O95402 600 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 C8GP07360 202 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 IMPA1P29218 277 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 ELK3P41970 407 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 AIMP2Q13155 320 aaKnown RBP23.32■■□□□ 1.32
PRKCH-216ENST00000555542 RBM20Q5T481 1227 aaKnown RBP23.32■■□□□ 1.32
PRKCH-216ENST00000555542 KIAA0408Q6ZU52 694 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 CREG2Q8IUH2 290 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 IGDCC3Q8IVU1 814 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 GPATCH11Q8N954 259 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 TM9SF4Q92544 642 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 MIEF2Q96C03 454 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 C10orf90Q96M02 699 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 TRIM51Q9BSJ1 452 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 TRIM31Q9BZY9 425 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 SEMA3GQ9NS98 782 aa23.32■■□□□ 1.32
PRKCH-216ENST00000555542 RUVBL1Q9Y265 456 aaKnown RBP23.32■■□□□ 1.32
PRKCH-216ENST00000555542 HEATR5BQ9P2D3 2071 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 CCDC188H7C350 402 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 ALOX12BO75342 701 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 SORBS2O94875 1100 aaKnown RBP23.31■■□□□ 1.32
PRKCH-216ENST00000555542 IVDP26440 423 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 ARL4CP56559 192 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 PDAP1Q13442 181 aaKnown RBP23.31■■□□□ 1.32
PRKCH-216ENST00000555542 HIF1AQ16665 826 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 HKDC1Q2TB90 917 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 PRTGQ2VWP7 1150 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 TUBB8Q3ZCM7 444 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 PRAMEF13Q5VWM6 474 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 SLC6A19Q695T7 634 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 ZNF425Q6IV72 752 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 PAQR3Q6TCH7 311 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 CNTN4Q8IWV2 1026 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 RBMXL3Q8N7X1 1067 aaKnown RBP23.31■■□□□ 1.32
PRKCH-216ENST00000555542 STT3BQ8TCJ2 826 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 ALKBH8Q96BT7 664 aaKnown RBP23.31■■□□□ 1.32
PRKCH-216ENST00000555542 LINGO1Q96FE5 620 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 SNF8Q96H20 258 aa23.31■■□□□ 1.32
PRKCH-216ENST00000555542 CCDC138Q96M89 665 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms