RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 NEIL2Q969S2 332 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 SAMD11Q96NU1 681 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 BDH2Q9BUT1 245 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 SOX17Q9H6I2 414 aaPredicted RBP23.49■■□□□ 1.35
TMEM260-207ENST00000555497 PADI4Q9UM07 663 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 KIF26AQ9ULI4 1882 aaPredicted RBP23.49■■□□□ 1.35
TMEM260-207ENST00000555497 PCM1Q15154 2024 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 MYCLP1P12525 358 aaPredicted RBP23.49■■□□□ 1.35
TMEM260-207ENST00000555497 HNF4AP41235 474 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 IL12RB1P42701 662 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 WNT3P56703 355 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 ERVK-21P61565 698 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 CHRNB3Q05901 458 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 EIF4HQ15056 248 aaKnown RBP23.49■■□□□ 1.35
TMEM260-207ENST00000555497 TMEM132CQ8N3T6 1108 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 FBXL20Q96IG2 436 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 REXO4Q9GZR2 422 aaKnown RBP23.49■■□□□ 1.35
TMEM260-207ENST00000555497 MAGED1Q9Y5V3 778 aaPredicted RBP23.49■■□□□ 1.35
TMEM260-207ENST00000555497 SMIM31A0A1B0GVY4 71 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 FAM220BPB1ANY3 271 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 YY2O15391 372 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 ZNF8P17098 575 aaPredicted RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 PRPS1L1P21108 318 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 MYF6P23409 242 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 GSTT1P30711 240 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 OPRD1P41143 372 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 RPS9P46781 194 aaKnown RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 RAE1P78406 368 aaKnown RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 ZNF33BQ06732 778 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 AP1ARQ63HQ0 302 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 SLCO4C1Q6ZQN7 724 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 TSPAN14Q8NG11 270 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 OR7G3Q8NG95 312 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 NETO1Q8TDF5 533 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 TRIM39Q9HCM9 518 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 DENND4AQ7Z401 1863 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 TBC1D3BA6NDS4 549 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 SCN2BO60939 215 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 SCELO95171 688 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 SNAP29O95721 258 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 ETS2P15036 469 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 KIR3DL1P43629 444 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 DPTQ07507 201 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 PON2Q15165 354 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 TMEM52BQ4KMG9 183 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 CYBRD1Q53TN4 286 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 CWF19L1Q69YN2 538 aaKnown RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 CRTC3Q6UUV7 619 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 ERN2Q76MJ5 926 aaKnown RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 PLA2G15Q8NCC3 412 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 TNIP2Q8NFZ5 429 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 CYGBQ8WWM9 190 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 TMBIM1Q969X1 311 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 FAM162AQ96A26 154 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 FAM120BQ96EK7 910 aaKnown RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 OSBPL6Q9BZF3 934 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 THG1LQ9NWX6 298 aaKnown RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 SMPD3Q9NY59 655 aaPredicted RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 BTBD3Q9Y2F9 522 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 MYRFQ9Y2G1 1151 aa23.48■■□□□ 1.35
TMEM260-207ENST00000555497 YBX2Q9Y2T7 364 aaKnown RBP23.48■■□□□ 1.35
TMEM260-207ENST00000555497 RFXANKO14593 260 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 CREG1O75629 220 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 PRKD3O94806 890 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 C7P10643 843 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 TBPL1P62380 186 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 ROR2Q01974 943 aaKnown RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 RBBP5Q15291 538 aaKnown RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 CATSPEREQ5SY80 951 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 OTUD3Q5T2D3 398 aaPredicted RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 ANKRD26P1Q6NSI1 321 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 VITQ6UXI7 678 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 GPR149Q86SP6 731 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 HUS1BQ8NHY5 278 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 UGT2B28Q9BY64 529 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 SFXN1Q9H9B4 322 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 C8orf4Q9NR00 106 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 PRKAB1Q9Y478 270 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 VILLO15195 856 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 POP7O75817 140 aaKnown RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 P2RY2P41231 377 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 MTHFRP42898 656 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 DOK6Q6PKX4 331 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 SYTL1Q8IYJ3 562 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 GALNT15Q8N3T1 639 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 FBXO15Q8NCQ5 510 aaPredicted RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 RMND5BQ96G75 393 aaPredicted RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 ZCCHC2Q9C0B9 1178 aaKnown RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 PRSS16Q9NQE7 514 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 DCAF13Q9NV06 445 aaKnown RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 RUVBL1Q9Y265 456 aaKnown RBP23.47■■□□□ 1.35
TMEM260-207ENST00000555497 PCDHGA11Q9Y5H2 935 aa23.47■■□□□ 1.35
TMEM260-207ENST00000555497 DEAF1O75398 565 aaPredicted RBP23.46■■□□□ 1.35
TMEM260-207ENST00000555497 NPPBP16860 134 aa23.46■■□□□ 1.35
TMEM260-207ENST00000555497 IST1P53990 364 aa23.46■■□□□ 1.35
TMEM260-207ENST00000555497 ACSM2AQ08AH3 577 aa23.46■■□□□ 1.35
TMEM260-207ENST00000555497 E2F2Q14209 437 aa23.46■■□□□ 1.35
TMEM260-207ENST00000555497 NFE2L1Q14494 772 aa23.46■■□□□ 1.35
TMEM260-207ENST00000555497 ACSM2BQ68CK6 577 aa23.46■■□□□ 1.35
TMEM260-207ENST00000555497 RBM44Q6ZP01 1051 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms