RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 AVL9Q8NBF6 648 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 PPFIBP2Q8ND30 876 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 RCBTB1Q8NDN9 531 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 OR52E1Q8NGJ3 308 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 FAM45AQ8TCE6 357 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 ACTRT2Q8TDY3 377 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 EEF1AKMT1Q8WVE0 214 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 WDR60Q8WVS4 1066 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 LCN9Q8WX39 176 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 ADAMTS14Q8WXS8 1223 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 RSC1A1Q92681 617 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 KCNJ9Q92806 393 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 LINGO1Q96FE5 620 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 FAR2Q96K12 515 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 SCYL1Q96KG9 808 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 FOPNLQ96NB1 174 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 GPR78Q96P69 363 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 IL17FQ96PD4 163 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 MYCBPQ99417 103 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 THTPAQ9BU02 230 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-213ENST00000555386 SEMA6CQ9H3T2 930 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 TCF7L2Q9NQB0 619 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 KLK13Q9UKR3 277 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 CLCA2Q9UQC9 943 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 DHRS7Q9Y394 339 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 CACNA1AO00555 2505 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 FRYQ5TBA9 3013 aa9.55□□□□□ -0.88
PSEN1-213ENST00000555386 GSAPA4D1B5 854 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 D6RAR5 112 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 H0Y3Z8 333 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 NVLO15381 856 aaKnown RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 PHGDHO43175 533 aaKnown RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 KRT36O76013 467 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 RPSAP08865 295 aaKnown RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 SBK3P0C264 359 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 PNLIPP16233 465 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 POLR2CP19387 275 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 CSF2RBP32927 897 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 RGS4P49798 205 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 CLNS1AP54105 237 aaKnown RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 GFERP55789 205 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 PPP1CAP62136 330 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 AP2B1P63010 937 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 CFHR1Q03591 330 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 HERC3Q15034 1050 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 FAM83EQ2M2I3 478 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 CCSMST1Q4G0I0 132 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 SH2D4BQ5SQS7 431 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 ARMC6Q6NXE6 501 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 FAM92BQ6ZTR7 304 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 ACAD11Q709F0 780 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 RAB44Q7Z6P3 723 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 MYLK4Q86YV6 388 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 CEP97Q8IW35 865 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 SPATA6LQ8N4H0 392 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 CPSF7Q8N684 471 aaKnown RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 KCTD4Q8WVF5 259 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 DNAJC9Q8WXX5 260 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 JADE3Q92613 823 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 SCNM1Q9BWG6 230 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 SRMSQ9H3Y6 488 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 KIR3DX1Q9H7L2 352 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 MVB12BQ9H7P6 319 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 SLC7A8Q9UHI5 535 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 CORO1CQ9ULV4 474 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.54□□□□□ -0.88
PSEN1-213ENST00000555386 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 FREM2Q5SZK8 3169 aa9.54□□□□□ -0.88
PSEN1-213ENST00000555386 A0A088AWK7 358 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 LILRA5A6NI73 299 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 TRPC5OSA6NMA1 111 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 TK2O00142 265 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 CAPN5O15484 640 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 DLX3O60479 287 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 CPNE6O95741 557 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 RBP1P09455 135 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 THRAP10827 490 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 COX4I1P13073 169 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 TFEBP19484 476 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 NCF2P19878 526 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 FDXRP22570 491 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ATP5F1P24539 256 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 NDUFS1P28331 727 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 SEPHS1P49903 392 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 IL2P60568 153 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 GALNT1Q10472 559 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 KLF10Q13118 480 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 MUM1Q2TAK8 710 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ARL13AQ5H913 290 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 C1orf146Q5VVC0 180 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 KLC3Q6P597 504 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 PGM2L1Q6PCE3 622 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 TTC23LQ6PF05 361 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 ZNF574Q6ZN55 896 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 LRRC74BQ6ZQY2 392 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 RIPOR1Q6ZS17 1223 aa9.53□□□□□ -0.88
PSEN1-213ENST00000555386 UBE2R2Q712K3 238 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
PSEN1-213ENST00000555386 TBC1D21Q8IYX1 336 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms