RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TSPAN12O95859 305 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 OTCP00480 354 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 ITGA2P17301 1181 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 ALOX12P18054 663 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 KRT20P35900 424 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 GZMMP51124 257 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 DAPP51397 102 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 DGKQP52824 942 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 ERVPABLB-1P60509 514 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 MRPS15P82914 257 aaKnown RBP10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 HTRA3P83110 453 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CACNG1Q06432 222 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 TTLL9Q3SXZ7 439 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 TIMM50Q3ZCQ8 353 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CTSL3PQ5NE16 218 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 RNF219Q5W0B1 726 aaPredicted RBP10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 ANKRD34AQ69YU3 496 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 LAIR1Q6GTX8 287 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 IL27RAQ6UWB1 636 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CCDC190Q86UF4 302 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 FAM83FQ8NEG4 500 aaPredicted RBP10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 ST13P5Q8NFI4 369 aaPredicted RBP10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 METTL6Q8TCB7 284 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CD200R1Q8TD46 325 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 PXYLP1Q8TE99 480 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 FAM120BQ96EK7 910 aaKnown RBP10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 LINGO1Q96FE5 620 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CRELD1Q96HD1 420 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 DEPDC7Q96QD5 511 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 ACOX2Q99424 681 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CPPED1Q9BRF8 314 aaPredicted RBP10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 DPY30Q9C005 99 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 RNF38Q9H0F5 515 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 KCNH6Q9H252 994 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CLMPQ9H6B4 373 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 ZBTB20Q9HC78 741 aaPredicted RBP10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 EXD2Q9NVH0 621 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 FKBP14Q9NWM8 211 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 FBXL12Q9NXK8 326 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 EHD3Q9NZN3 535 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CD274Q9NZQ7 290 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 GALPQ9UBC7 116 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 AFF4Q9UHB7 1163 aaKnown RBP10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 STOML2Q9UJZ1 356 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 FBXO10Q9UK96 956 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 SATB2Q9UPW6 733 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 CFL2Q9Y281 166 aa10.4□□□□□ -0.75
MTHFD1-210ENST00000555252 DSCR3O14972 297 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 PER2O15055 1255 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 NBNO60934 754 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 LCKP06239 509 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 PGRP06401 933 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 PRKCAP17252 672 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 LIPAP38571 399 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 SLC15A1P46059 708 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 GATMP50440 423 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 EIF4HQ15056 248 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 TIGD6Q17RP2 521 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 FAM209AQ5JX71 171 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 CACHD1Q5VU97 1274 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 PSAPL1Q6NUJ1 521 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 METTL2BQ6P1Q9 378 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 PRSS55Q6UWB4 352 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 MSANTD1Q6ZTZ1 278 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 VN1R5Q7Z5H4 357 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 ADAMTSL2Q86TH1 951 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 P3H2Q8IVL5 708 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 MSRB3Q8IXL7 192 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 TMEM132CQ8N3T6 1108 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 SIDT2Q8NBJ9 832 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 C9orf43Q8TAL5 461 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 CHTF18Q8WVB6 975 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 TRMT2BQ96GJ1 504 aaKnown RBP10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 HRASLS5Q96KN8 279 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 EXOC2Q96KP1 924 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 KLF16Q9BXK1 252 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 GABARAPL3Q9BY60 117 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 C3orf14Q9HBI5 128 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 SLC25A37Q9NYZ2 338 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 RPS6KA6Q9UK32 745 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 IKZF3Q9UKT9 509 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 CAB39Q9Y376 341 aaPredicted RBP10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 DHRS7Q9Y394 339 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 PCDHGC4Q9Y5F7 938 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 ACTL7AQ9Y615 435 aa10.39□□□□□ -0.75
MTHFD1-210ENST00000555252 HMX3A6NHT5 357 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 M0R082 166 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 MITFO75030 526 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 NIPSNAP2O75323 286 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 WBP4O75554 376 aaKnown RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 KLKB1P03952 638 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 CAPN1P07384 714 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 YES1P07947 543 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 NCF1P14598 390 aaPredicted RBP10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 RPS3P23396 243 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■■□□ 16.9
MTHFD1-210ENST00000555252 PIK3CBP42338 1070 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 AGTR2P50052 363 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 ARF5P84085 180 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 GPR50Q13585 617 aa10.38□□□□□ -0.75
MTHFD1-210ENST00000555252 SIM2Q14190 667 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms