RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 HERC3Q15034 1050 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 SUSD4Q5VX71 490 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 CYB5D1Q6P9G0 228 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 IYDQ6PHW0 289 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 IL17RELQ6ZVW7 336 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 CNBD1Q8NA66 436 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 NCOA7Q8NI08 942 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 LRRC8CQ8TDW0 803 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 TEKT1Q969V4 418 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 FAM49AQ9H0Q0 323 aaPredicted RBP4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 SIX2Q9NPC8 291 aa4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 C19orf25Q9UFG5 118 aaPredicted RBP4.9□□□□□ -1.63
CKS1BP1-201ENST00000555221 SDR42E2A6NKP2 422 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 TMEM150CB9EJG8 249 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 PRSS44E7EML9 344 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 ZNF263O14978 683 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 PCDH7O60245 1069 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 CLPTM1O96005 669 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 SERPING1P05155 500 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 OAS2P29728 719 aaKnown RBP4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 SNU13P55769 128 aaKnown RBP4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 KCNJ10P78508 379 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 CDR2Q01850 454 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 MORF4L2Q15014 288 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 SMU1Q2TAY7 513 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 KIAA1644Q3SXP7 199 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 GLRA4Q5JXX5 417 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 LCN1P1Q5VSP4 162 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 RUSC1-AS1Q66K80 236 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 CTR9Q6PD62 1173 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 G2E3Q7L622 706 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 DCUN1D3Q8IWE4 304 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 UNC45BQ8IWX7 931 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 SYCP3Q8IZU3 236 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 MARVELD2Q8N4S9 558 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 CCDC63Q8NA47 563 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 UXS1Q8NBZ7 420 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 OR10V1Q8NGI7 309 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 LMLNQ96KR4 655 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 GDAP1L1Q96MZ0 367 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 MMADHCQ9H3L0 296 aaPredicted RBP4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 IL1RAPL2Q9NP60 686 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 PPANQ9NQ55 473 aaKnown RBP4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 TNNQ9UQP3 1299 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 IL16Q14005 1332 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 HEG1Q9ULI3 1381 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 SCN5AQ14524 2016 aa4.89□□□□□ -1.63
CKS1BP1-201ENST00000555221 MYO15BQ96JP2 1530 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 NACADO15069 1562 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 C2CD4DB7Z1M9 353 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 KLF11O14901 512 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 ST8SIA3O43173 380 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 FMO6PO60774 539 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 GLRA3O75311 464 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 MOCS2O96007 188 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 EEF2P13639 858 aaKnown RBP4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 ALDH4A1P30038 563 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 CETN2P41208 172 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 GLIPR1P48060 266 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 NPBWR1P48145 328 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 ST8SIA6P61647 398 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 ASIC1P78348 528 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 IL10RBQ08334 325 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 OPCMLQ14982 345 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 P2RY6Q15077 328 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 CCDC6Q16204 474 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 ZNF674Q2M3X9 581 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 XKR3Q5GH77 459 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 CCDC158Q5M9N0 1113 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 FUT10Q6P4F1 479 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 BTNL8Q6UX41 500 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 SLC16A9Q7RTY1 509 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 ANKRD33Q7Z3H0 272 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 PIGZQ86VD9 579 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 APCDD1Q8J025 514 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 UBLCP1Q8WVY7 318 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 GIMAP5Q96F15 307 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 NODALQ96S42 347 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 LSG1Q9H089 658 aaKnown RBP4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 DNAJC17Q9NVM6 304 aaKnown RBP4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 SLCO1C1Q9NYB5 712 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 PROCRQ9UNN8 238 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 KCNJ14Q9UNX9 436 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 RUVBL2Q9Y230 463 aaKnown RBP4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 TCF19Q9Y242 345 aa4.88□□□□□ -1.63
CKS1BP1-201ENST00000555221 GREB1LQ9C091 1923 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 C17orf105B2RV13 164 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 KBTBD13C9JR72 458 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 BLOC1S5-TXNDC5H3BN57 136 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 ZNF197O14709 1029 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 EPHB6O15197 1021 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 CDK2AP2O75956 126 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 ZNF432O94892 652 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 ERVK-10P10266 1014 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 DARSP14868 501 aaKnown RBP4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 ITIH1P19827 911 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 LHCGRP22888 699 aa4.87□□□□□ -1.63
CKS1BP1-201ENST00000555221 CCND3P30281 292 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms