RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 TRIM42Q8IWZ5 723 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 TCAIMQ8N3R3 496 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 LINC01555Q8NAE3 123 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 RCBTB1Q8NDN9 531 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 ZNF480Q8WV37 535 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 L3HYPDHQ96EM0 354 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 MED8Q96G25 268 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 C7orf26Q96N11 449 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 TMEM237Q96Q45 408 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 MENTQ9BUN1 341 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 DRC3Q9H069 523 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 PCBD2Q9H0N5 130 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 FANCEQ9HB96 536 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 TNFRSF12AQ9NP84 129 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 C1GALT1Q9NS00 363 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 PNPOQ9NVS9 261 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 THAP1Q9NVV9 213 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 STOX2Q9P2F5 926 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-218ENST00000555213 KLK13Q9UKR3 277 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 MSRB2Q9Y3D2 182 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 PCDHB11Q9Y5F2 797 aa10.52□□□□□ -0.73
SHMT2-218ENST00000555213 NCOR2Q9Y618 2525 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 EPG5Q9HCE0 2579 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 KRT87PA6NCN2 255 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 PPP6CO00743 305 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 UBFD1O14562 309 aaKnown RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 SIX3O95343 332 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 CHRNGP07510 517 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 IMPA1P29218 277 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 RBMS1P29558 406 aaKnown RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 CMPK1P30085 196 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 MLLT3P42568 568 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 SEPHS1P49903 392 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 TBPL1P62380 186 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 GABREP78334 506 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 HSD11B2P80365 405 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 C16orf72Q14CZ0 275 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 SF1Q15637 639 aaKnown RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 C18orf21Q32NC0 220 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 ARL13AQ5H913 290 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 CDKL4Q5MAI5 379 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 ZNF678Q5SXM1 525 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 PRAMEF13Q5VWM6 474 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 FAM219BQ5XKK7 198 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 CAPN13Q6MZZ7 669 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 AGTRAPQ6RW13 159 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 C6orf89Q6UWU4 347 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 ARHGAP22Q7Z5H3 698 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 FBXO39Q8N4B4 442 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 C2orf73Q8N5S3 287 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 RFWD2Q8NHY2 731 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 EXT2Q93063 718 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 FBXL8Q96CD0 374 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 PHF21BQ96EK2 531 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 SEC16BQ96JE7 1060 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 OR2A14Q96R47 310 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 MAP3K3Q99759 626 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 C1QTNF3Q9BXJ4 246 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 NRSN2Q9GZP1 204 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 FAM107BQ9H098 131 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 GSTO2Q9H4Y5 243 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 POLR1BQ9H9Y6 1135 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 SPHK1Q9NYA1 384 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 WWOXQ9NZC7 414 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 NUDT4Q9NZJ9 180 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 CD274Q9NZQ7 290 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 PISDQ9UG56 409 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 HAO1Q9UJM8 370 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 MID2Q9UJV3 735 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 PTBP2Q9UKA9 531 aaKnown RBP10.51□□□□□ -0.73
SHMT2-218ENST00000555213 SATB2Q9UPW6 733 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 ASB1Q9Y576 335 aa10.51□□□□□ -0.73
SHMT2-218ENST00000555213 NCF1BA6NI72 391 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-218ENST00000555213 EFCAB7A8K855 629 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 NCF1CA8MVU1 366 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-218ENST00000555213 TMEM114B3SHH9 223 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 B4E171 279 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 SUPT3HB4E1H0 165 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 E7ENX8 843 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 KIF1CO43896 1103 aaKnown RBP10.5□□□□□ -0.73
SHMT2-218ENST00000555213 NPHS1O60500 1241 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 SUPT3HO75486 399 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 NCF1P14598 390 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-218ENST00000555213 NELFEP18615 380 aaKnown RBP10.5□□□□□ -0.73
SHMT2-218ENST00000555213 SPINK2P20155 84 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 TSPAN7P41732 249 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 LSSP48449 732 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 AGTR2P50052 363 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 RAB15P59190 212 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 ABATP80404 500 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 ACY1Q03154 408 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 TAP2Q03519 686 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 FASTKQ14296 549 aaKnown RBP10.5□□□□□ -0.73
SHMT2-218ENST00000555213 TGFBIQ15582 683 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 PFKFB4Q16877 469 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 FBXO48Q5FWF7 155 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 MBOAT1Q6ZNC8 495 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 MAVSQ7Z434 540 aa10.5□□□□□ -0.73
SHMT2-218ENST00000555213 TRIM73Q86UV7 250 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms