RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TATDN1Q6P1N9 297 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 OR6Q1Q8NGQ2 317 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MFSD8Q8NHS3 518 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 FANK1Q8TC84 345 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ANKRD7Q92527 254 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CPQQ9Y646 472 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PTCH2Q9Y6C5 1203 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 FER1L6Q2WGJ9 1857 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 AGPSO00116 658 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CH25HO95992 272 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PTPN2P17706 415 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ERN2Q76MJ5 926 aaKnown RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MARCH9Q86YJ5 346 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 TOP6BLQ8N6T0 577 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 OR10A6Q8NH74 314 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 IL4I1Q96RQ9 567 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 EHD4Q9H223 541 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ABCB8Q9NUT2 735 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SPATA31A5Q5VU36 1347 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SPATA31A7Q8IWB4 1347 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PRKAR1BP31321 381 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MLLT1Q03111 559 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PRRT3Q5FWE3 981 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 USP50Q70EL3 339 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 C12orf40Q86WS4 652 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SPRYD4Q8WW59 207 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF180Q9UJW8 692 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 HCN2Q9UL51 889 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 REXO2Q9Y3B8 237 aaKnown RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 KCNU1A8MYU2 1149 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 SLC2A2P11168 524 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PIM1P11309 404 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 GDI1P31150 447 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 OR2B6P58173 313 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 FPGSQ05932 587 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 AARDQ4LEZ3 155 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 CBR4Q8N4T8 237 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF610Q8N9Z0 462 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 MIPEPQ99797 713 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 WDR55Q9H6Y2 383 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ARHGAP20Q9P2F6 1191 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 C19orf25Q9UFG5 118 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-216ENST00000555002 ITGB1BP2Q9UKP3 347 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 PEX16Q9Y5Y5 336 aa6.73□□□□□ -1.33
SYNE2-216ENST00000555002 IRS2Q9Y4H2 1338 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ACTL6BO94805 426 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TSGA10IPQ3SY00 556 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 HGSNATQ68CP4 663 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 HAGHLQ6PII5 290 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 BBS12Q6ZW61 710 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 LIX1LQ8IVB5 337 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PHOSPHO1Q8TCT1 267 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 GCDHQ92947 438 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 NODALQ96S42 347 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PKP4Q99569 1192 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 FTSJ1Q9UET6 329 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 RUVBL1Q9Y265 456 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 KLK1P06870 262 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 RPL10P27635 214 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 MATKP42679 507 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SLBPQ14493 270 aaKnown RBP eCLIP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM119Q4V9L6 283 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 NAPRTQ6XQN6 538 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 FRS2Q8WU20 508 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PSKH2Q96QS6 385 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 OR1F2PQ96R84 312 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF670Q9BS34 389 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 RGCCQ9H4X1 137 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SLC17A7Q9P2U7 560 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SHROOM3Q8TF72 1996 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 GOT2P00505 430 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 CCNFP41002 786 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 HEPACAMQ14CZ8 416 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 IFI44LQ53G44 452 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PRSS55Q6UWB4 352 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 P2RY8Q86VZ1 359 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 OR4C15Q8NGM1 316 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 AGAP11Q8TF27 550 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 BARD1Q99728 777 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 RHOJQ9H4E5 214 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 LAMP5Q9UJQ1 280 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 POFUT2Q9Y2G5 429 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PCDH7O60245 1069 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 USP43Q70EL4 1123 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 POP5Q969H6 163 aaKnown RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PWWP2AQ96N64 755 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 XKR8Q9H6D3 395 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 PRMT8Q9NR22 394 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 FKBPLQ9UIM3 349 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SMIM30A4D0T7 59 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF705EA8MWA4 302 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 SOX1O00570 391 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 IFNA7P01567 189 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 EPHA1P21709 976 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 GRPRP30550 384 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 TOB1P50616 345 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-216ENST00000555002 MTPNP58546 118 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 ECT2LQ008S8 904 aa6.72□□□□□ -1.33
SYNE2-216ENST00000555002 MERTKQ12866 999 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms