RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PTDSS1P48651 473 aaKnown RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 CSNK1DP48730 415 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ALDH9A1P49189 494 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 NDST2P52849 883 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 LOXL3P58215 753 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 YBEYP58557 167 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ACTR1AP61163 376 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 TAP2Q03519 686 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 FOXM1Q08050 763 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 RALGDSQ12967 914 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 DNASE1L3Q13609 305 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ACOX1Q15067 660 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 CYP2A13Q16696 494 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 CD300EQ496F6 205 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 PTPN20Q4JDL3 420 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 TIGD2Q4W5G0 525 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ZNF658Q5TYW1 1059 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 MANEALQ5VSG8 457 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 PLAG1Q6DJT9 500 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 JMJD6Q6NYC1 403 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM108Q6UXF1 575 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 DPPA4Q7L190 304 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ARCQ7LC44 396 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 BNIPLQ7Z465 357 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM135Q86UB9 458 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 FAM131BQ86XD5 332 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 CAMK1DQ8IU85 385 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ZNF527Q8NB42 609 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 GLIS1Q8NBF1 620 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 PNPLA2Q96AD5 504 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 STAMBPL1Q96FJ0 436 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 DHTKD1Q96HY7 919 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 FRMD8Q9BZ67 464 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 MAGEB5Q9BZ81 275 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 ULBP3Q9BZM4 244 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 STN1Q9H668 368 aaKnown RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 SUDS3Q9H7L9 328 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-228ENST00000554592 LHX9Q9NQ69 397 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 SYBUQ9NX95 663 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 SLC39A10Q9ULF5 831 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 CAPN11Q9UMQ6 739 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 SUFUQ9UMX1 484 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 SLC17A4Q9Y2C5 497 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 DOCK9Q9BZ29 2069 aa4.77□□□□□ -1.65
ATXN3-228ENST00000554592 TRIM49BA6NDI0 452 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 GOLGA6L3A6NEY3 463 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ANKUB1A6NFN9 424 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 BECN2A8MW95 431 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 A8MX80 341 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 FAM72CH0Y354 149 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 PSMA7O14818 248 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 TOX3O15405 576 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 CCP110O43303 1012 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 SPAG6O75602 509 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 CEACAM4O75871 244 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 KIAA0754O94854 1291 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 INMTO95050 263 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 NDUFA10O95299 355 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 SMC2O95347 1197 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 FGF5P12034 268 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 GM2AP17900 193 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ITGALP20701 1170 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ITGA3P26006 1051 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 TEAD1P28347 426 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 SERPINA4P29622 427 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 CASP14P31944 242 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 POLD2P49005 469 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 RPS15P62841 145 aaKnown RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 CDK3Q00526 305 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 BCL2L1Q07817 233 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 NSUN2Q08J23 767 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 GALNT1Q10472 559 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 STIM1Q13586 685 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ZRSR2Q15696 482 aaKnown RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 CHRNA6Q15825 494 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 INSCQ1MX18 579 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 LRRK1Q38SD2 2015 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 PARP15Q460N3 678 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 PRR30Q53SZ7 412 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 FAM72AQ5TYM5 149 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 FAM72DQ6L9T8 149 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 PGBD2Q6P3X8 592 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 IYDQ6PHW0 289 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 Q6YL49 198 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 SYVN1Q86TM6 617 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 SLC9B2Q86UD5 537 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 FAM72BQ86X60 149 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 RASGRP3Q8IV61 690 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 MCEMP1Q8IX19 187 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 ADGRG5Q8IZF4 528 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 PELI3Q8N2H9 469 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 SFRP1Q8N474 314 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 PAF1Q8N7H5 531 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 RTL3Q8N8U3 475 aaKnown RBP4.76□□□□□ -1.65
ATXN3-228ENST00000554592 AVL9Q8NBF6 648 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 TMEM35BQ8NCS4 154 aa4.76□□□□□ -1.65
ATXN3-228ENST00000554592 GPR150Q8NGU9 434 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms