RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 SLC26A1Q9H2B4 701 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 WDR54Q9H977 334 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 CORO1CQ9ULV4 474 aaPredicted RBP8.35□□□□□ -1.07
ACTN1-213ENST00000554508 ZNF451Q9Y4E5 1061 aa8.35□□□□□ -1.07
ACTN1-213ENST00000554508 SCN3AQ9NY46 2000 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 HYKKA2RU49 373 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 E7ENX8 843 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 TXNDC9O14530 226 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 SLC16A5O15375 505 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 BANF1O75531 89 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 SEC31AO94979 1220 aaKnown RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 SLC16A8O95907 504 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 SYF2O95926 243 aaKnown RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 C8GP07360 202 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 F7P08709 466 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 NR1D1P20393 614 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 ITGAXP20702 1163 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 HRH2P25021 359 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 MCM3P25205 808 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 GABRB3P28472 473 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 ELK3P41970 407 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 ARL4CP56559 192 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 TIAL1Q01085 375 aaKnown RBP eCLIP8.34□□□□□ -1.074e-6■■■□□ 18.3
ACTN1-213ENST00000554508 GUCY2DQ02846 1103 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 TAP2Q03519 686 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 CHAF1BQ13112 559 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 CBLBQ13191 982 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 SP140Q13342 867 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 TSTA3Q13630 321 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 ATP1A4Q13733 1029 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 FRG1Q14331 258 aaKnown RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 SLC9A5Q14940 896 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 HIF1AQ16665 826 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 MUM1Q2TAK8 710 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 GLE1Q53GS7 698 aaKnown RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 TEDDM1Q5T9Z0 273 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 FAM69BQ5VUD6 431 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 FRMPD2BQ6IN97 320 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 PRMT9Q6P2P2 845 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 MRGPREQ86SM8 312 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 PAQR7Q86WK9 346 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 IGDCC3Q8IVU1 814 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 LRRC56Q8IYG6 542 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 CPNE9Q8IYJ1 553 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 MYO1HQ8N1T3 1032 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 EEF1AKMT1Q8WVE0 214 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 VPS50Q96JG6 964 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 CCDC138Q96M89 665 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 PCBD2Q9H0N5 130 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 L2HGDHQ9H9P8 463 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 ZNF304Q9HCX3 659 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 PPANQ9NQ55 473 aaKnown RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 SLC22A11Q9NSA0 550 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 GPR83Q9NYM4 423 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 WHRNQ9P202 907 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 C5AR2Q9P296 337 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 ZC3H7BQ9UGR2 993 aaKnown RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 TAC3Q9UHF0 121 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 NXT1Q9UKK6 140 aaKnown RBP8.34□□□□□ -1.07
ACTN1-213ENST00000554508 CDC14AQ9UNH5 594 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 TEX264Q9Y6I9 313 aa8.34□□□□□ -1.07
ACTN1-213ENST00000554508 LOC105369274A0A096LPK9 316 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 LOC102723532A0A0G2JNH3 316 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 ESYT3A0FGR9 886 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 H0YGG7 62 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PYCARD-AS1I3L0S3 204 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PRPF4O43172 522 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■□□ 16.1
ACTN1-213ENST00000554508 DPM1O60762 260 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 CNOT3O75175 753 aaKnown RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PDGFAP04085 211 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 EIF2S1P05198 315 aaKnown RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 UMODP07911 640 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 HIST1H2AGP0C0S8 130 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 RHOXF2BP0C7M4 288 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 EZRP15311 586 aaKnown RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 HIST1H2ADP20671 130 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 MMP11P24347 488 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 CCND1P24385 295 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 IMPA1P29218 277 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PLTPP55058 493 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 SOX8P57073 446 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 IL2P60568 153 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 ARF3P61204 181 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 YBX1P67809 324 aaKnown RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 NKG7Q16617 165 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PRTGQ2VWP7 1150 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 DCAF10Q5QP82 559 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 THEMIS2Q5TEJ8 643 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 GARNL3Q5VVW2 1013 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 STEAP4Q687X5 459 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 DUPD1Q68J44 220 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 ZNF425Q6IV72 752 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 FAM45BPQ6NSW5 357 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PIWIL4Q7Z3Z4 852 aaKnown RBP8.33□□□□□ -1.08
ACTN1-213ENST00000554508 OR4N4Q8N0Y3 316 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 CLEC1AQ8NC01 280 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PPFIBP2Q8ND30 876 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 FDCSPQ8NFU4 85 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 FAM45AQ8TCE6 357 aa8.33□□□□□ -1.08
ACTN1-213ENST00000554508 PCSK5Q92824 1860 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms