RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 RGS4P49798 205 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 PGDP52209 483 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 ABATP80404 500 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 TAP2Q03519 686 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 TLE1Q04724 770 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 PRDX1Q06830 199 aaKnown RBP9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 CBLBQ13191 982 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 CUL1Q13616 776 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 FASTKQ14296 549 aaKnown RBP9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 HIF1AQ16665 826 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 BBS9Q3SYG4 887 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 MLIPQ5VWP3 458 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 STEAP4Q687X5 459 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 TTLL10Q6ZVT0 673 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 ASB18Q6ZVZ8 466 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 MRGPREQ86SM8 312 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 KLHL7Q8IXQ5 586 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZNF480Q8WV37 535 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 PTERQ96BW5 349 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 SNF8Q96H20 258 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 PKP4Q99569 1192 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZFYVE21Q9BQ24 234 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 PLCD4Q9BRC7 762 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 DPH7Q9BTV6 452 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 SLC25A23Q9BV35 468 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 EPN3Q9H201 632 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 SLC6A20Q9NP91 592 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 SLC22A11Q9NSA0 550 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 CUTCQ9NTM9 273 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 NXT1Q9UKK6 140 aaKnown RBP9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 PTRH2Q9Y3E5 179 aaKnown RBP9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 TEX264Q9Y6I9 313 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 DOCK10Q96BY6 2186 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 NBPF19A0A087WUL8 3843 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 TTI1O43156 1089 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 KLHL41O60662 606 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 C8GP07360 202 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 EZRP15311 586 aaKnown RBP9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ITGAXP20702 1163 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ALAS2P22557 587 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 GABRB3P28472 473 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ELK3P41970 407 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ARL4CP56559 192 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 VSX2P58304 361 aaPredicted RBP9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 SP140Q13342 867 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ATP1A4Q13733 1029 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 WASHC2DQ5SRD0 308 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ICE2Q659A1 982 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 FRMPD2BQ6IN97 320 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZNF425Q6IV72 752 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 PRMT9Q6P2P2 845 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 UBE2R2Q712K3 238 aaPredicted RBP9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 OVCH1Q7RTY7 1134 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 PIWIL4Q7Z3Z4 852 aaKnown RBP9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 PAQR7Q86WK9 346 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 IGDCC3Q8IVU1 814 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 CPNE9Q8IYJ1 553 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 TEX19Q8NA77 164 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 MVB12AQ96EY5 273 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 FER1L6-AS2Q96M78 137 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ACAT2Q9BWD1 397 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 TRIM4Q9C037 500 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 PLAC1Q9HBJ0 212 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 MRPS30Q9NP92 439 aaKnown RBP9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 PRDM9Q9NQV7 894 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZC3H7BQ9UGR2 993 aaKnown RBP9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZNF451Q9Y4E5 1061 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 LRRK2Q5S007 2527 aa9.95□□□□□ -0.82
PTCD2P1-201ENST00000554393 SPENQ96T58 3664 aaKnown RBP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 IGKV1-8A0A0C4DH67 115 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 A0A0J9YVX5 310 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 HYKKA2RU49 373 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 E7ESA3 106 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 K7EM74 188 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 PEX12O00623 359 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 TXNDC9O14530 226 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 FANCGO15287 622 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 TP73O15350 636 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 SLC16A5O15375 505 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CNOT3O75175 753 aaKnown RBP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 BANF1O75531 89 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 AHSGP02765 367 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 PDGFAP04085 211 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 UMODP07911 640 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 F7P08709 466 aaPredicted RBP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 NR1D1P20393 614 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CCND1P24385 295 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 HRH2P25021 359 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 MCM3P25205 808 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 IMPA1P29218 277 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 OTX2P32243 289 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CARSP49589 748 aaKnown RBP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CCL11P51671 97 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 ITGA8P53708 1063 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 TIAL1Q01085 375 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 ILF2Q12905 390 aaKnown RBP9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 CHAF1BQ13112 559 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 NKG7Q16617 165 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 MUM1Q2TAK8 710 aa9.94□□□□□ -0.82
PTCD2P1-201ENST00000554393 PRTGQ2VWP7 1150 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms