RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GYS2P54840 703 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 CHIT1Q13231 466 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 SH2D4BQ5SQS7 431 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 TTC19Q6DKK2 380 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-210ENST00000553950 NXPE4Q6UWF7 544 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 RNF165Q6ZSG1 346 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 FAM47EQ6ZV65 393 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 MYLK4Q86YV6 388 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-210ENST00000553950 SFTPA2Q8IWL1 248 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 ABHD11Q8NFV4 315 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 OR4F6Q8NGB9 312 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 OR2A1Q8NGT9 310 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 RHBDD1Q8TEB9 315 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 RSC1A1Q92681 617 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 SORT1Q99523 831 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 ACAT2Q9BWD1 397 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 TRIM55Q9BYV6 548 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 ABCF3Q9NUQ8 709 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 TMEM184CQ9NVA4 438 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 ADGRE2Q9UHX3 823 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 SNX7Q9UNH6 387 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 PCDHGA11Q9Y5H2 935 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 KLK4Q9Y5K2 254 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 RP1P56715 2156 aa13.98□□□□□ -0.17
SHMT2-210ENST00000553950 GMNCA6NCL1 334 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 TRPC5OSA6NMA1 111 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 LYPLA1O75608 230 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 CDH1P12830 882 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 EZRP15311 586 aaKnown RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 ACP1P24666 158 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 ALDH4A1P30038 563 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 PEBP1P30086 187 aaKnown RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 REEP5Q00765 189 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 RELAQ04206 551 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 ILKQ13418 452 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 SQSTM1Q13501 440 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 ZXDCQ2QGD7 858 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 KANK2Q63ZY3 851 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 GUSBP11Q6P575 273 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 WDR74Q6RFH5 385 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 SLCO4C1Q6ZQN7 724 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 ZNF761Q86XN6 746 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 CLYBLQ8N0X4 340 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 LSMEM2Q8N112 164 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 C2orf73Q8N5S3 287 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 OR52B6Q8NGF0 335 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 IFI44Q8TCB0 444 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 STON2Q8WXE9 905 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 JPH3Q8WXH2 748 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 ZNF317Q96PQ6 595 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-210ENST00000553950 OR2A14Q96R47 310 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 NT5DC2Q9H857 520 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 PARD6AQ9NPB6 346 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 C1GALT1Q9NS00 363 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 TSC22D4Q9Y3Q8 395 aa13.97□□□□□ -0.17
SHMT2-210ENST00000553950 MDC1Q14676 2089 aaKnown RBP13.96□□□□□ -0.17
SHMT2-210ENST00000553950 LY6G6EA0A0G2JKS1 128 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 CPED1A4D0V7 1026 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 H0YIV9 168 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 TOX3O15405 576 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-210ENST00000553950 ITM2AO43736 263 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 WFS1O76024 890 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 OR4F21O95013 312 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 CD59P13987 128 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 TYRP1P17643 537 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 EPORP19235 508 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 CDH3P22223 829 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 MPSTP25325 297 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 PSMB5P28074 263 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 SH3BP2P78314 561 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 IFT88Q13099 833 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 SLBPQ14493 270 aaKnown RBP eCLIP13.96□□□□□ -0.17
SHMT2-210ENST00000553950 IRGCQ6NXR0 463 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 LETMD1Q6P1Q0 360 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 MED27Q6P2C8 311 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 RPS27LQ71UM5 84 aaKnown RBP13.96□□□□□ -0.17
SHMT2-210ENST00000553950 ADCK2Q7Z695 626 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 CPLX4Q7Z7G2 160 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 SYVN1Q86TM6 617 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 KMT5CQ86Y97 462 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 ZNF781Q8N8C0 355 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 METTL6Q8TCB7 284 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 CCT6BQ92526 530 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 ZUFSPQ96AP4 578 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 THAP11Q96EK4 314 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 CCDC3Q9BQI4 270 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 EPN3Q9H201 632 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 SEMA6CQ9H3T2 930 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 ELOVL6Q9H5J4 265 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 SLCO1B3Q9NPD5 702 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 FGFR1OP2Q9NVK5 253 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 SPHK1Q9NYA1 384 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 BTBD3Q9Y2F9 522 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 TRAF6Q9Y4K3 522 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 U3KQA8 63 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 UNC13CQ8NB66 2214 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 WDFY4Q6ZS81 3184 aa13.96□□□□□ -0.17
SHMT2-210ENST00000553950 TRBC2A0A5B9 178 aa13.95□□□□□ -0.18
SHMT2-210ENST00000553950 UBFD1O14562 309 aaKnown RBP13.95□□□□□ -0.18
SHMT2-210ENST00000553950 HDAC3O15379 428 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms