RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MENTQ9BUN1 341 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 TP63Q9H3D4 680 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-204ENST00000553605 MKKSQ9NPJ1 570 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-204ENST00000553605 KLHL8Q9P2G9 620 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-204ENST00000553605 STAB1Q9NY15 2570 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 IGHV3-20A0A0C4DH32 117 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 SLC5A10A0PJK1 596 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 ZNF487B1APH4 448 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 AP2A2O94973 939 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 CRTAMO95727 393 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 ERVK-10P10266 1014 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 MC4RP32245 332 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 SLC26A3P40879 764 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 EFNA3P52797 238 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 YBX1P67809 324 aaKnown RBP13.05□□□□□ -0.32
PRPF39-204ENST00000553605 ARSKQ6UWY0 536 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 ACAD11Q709F0 780 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 TAS2R42Q7RTR8 314 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 APTXQ7Z2E3 356 aaKnown RBP13.05□□□□□ -0.32
PRPF39-204ENST00000553605 TMTC1Q8IUR5 882 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 RPRMLQ8N4K4 120 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 TFB1MQ8WVM0 346 aaKnown RBP13.05□□□□□ -0.32
PRPF39-204ENST00000553605 METTL21AQ8WXB1 218 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 MVB12AQ96EY5 273 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 MMABQ96EY8 250 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-204ENST00000553605 IL17FQ96PD4 163 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 NPAS2Q99743 824 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 ZNF395Q9H8N7 513 aaPredicted RBP13.05□□□□□ -0.32
PRPF39-204ENST00000553605 CIDEBQ9UHD4 219 aa13.05□□□□□ -0.32
PRPF39-204ENST00000553605 TRBV5-4A0A0C4DH59 114 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 C3orf70A6NLC5 250 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-204ENST00000553605 GABRR3A8MPY1 467 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 CCL22O00626 93 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 MAN1A2O60476 641 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 FKBP9O95302 570 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 RAF1P04049 648 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 PRSS56P0CW18 603 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 NUP107P57740 925 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 DYNLT1P63172 113 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 PLOD1Q02809 727 aaPredicted RBP13.04□□□□□ -0.32
PRPF39-204ENST00000553605 SYTL3Q4VX76 610 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 PAMR1Q6UXH9 720 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 CHSY3Q70JA7 882 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 CPEB2Q7Z5Q1 589 aaKnown RBP13.04□□□□□ -0.32
PRPF39-204ENST00000553605 RFX6Q8HWS3 928 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 ZNF567Q8N184 647 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 AMER3Q8N944 861 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 OR2L8Q8NGY9 312 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 SMARCAL1Q9NZC9 954 aa13.04□□□□□ -0.32
PRPF39-204ENST00000553605 SCN2AQ99250 2005 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 NBEAL1Q6ZS30 2694 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 TFECO14948 347 aaPredicted RBP13.03□□□□□ -0.32
PRPF39-204ENST00000553605 NME2P1O60361 137 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 CDC40O60508 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRPF39-204ENST00000553605 PRMT3O60678 531 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 ATE1O95260 518 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 FTH1P02794 183 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 ANXA5P08758 320 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 NME2P22392 152 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 KIR2DL3P43628 341 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 EMP3P54852 163 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 KEAP1Q14145 624 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 GRB7Q14451 532 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 SYT16Q17RD7 645 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 PRTGQ2VWP7 1150 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 DNAJC21Q5F1R6 531 aaKnown RBP13.03□□□□□ -0.32
PRPF39-204ENST00000553605 UNC5DQ6UXZ4 953 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 RANBP10Q6VN20 620 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 MICALCLQ6ZW33 695 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
PRPF39-204ENST00000553605 VSIG1Q86XK7 387 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 ZC3H7AQ8IWR0 971 aaKnown RBP13.03□□□□□ -0.32
PRPF39-204ENST00000553605 CYTH2Q99418 400 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 C19orf43Q9BQ61 176 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 SAE1Q9UBE0 346 aaPredicted RBP13.03□□□□□ -0.32
PRPF39-204ENST00000553605 SLC39A10Q9ULF5 831 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 KLK4Q9Y5K2 254 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 ALG6Q9Y672 507 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 PRSS21Q9Y6M0 314 aa13.03□□□□□ -0.32
PRPF39-204ENST00000553605 HRNRQ86YZ3 2850 aaPredicted RBP13.02□□□□□ -0.33
PRPF39-204ENST00000553605 QSOX1O00391 747 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 NRP2O60462 931 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 SLC25A12O75746 678 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 TFEBP19484 476 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 NR2C2P49116 596 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 ZNF140P52738 457 aaPredicted RBP13.02□□□□□ -0.33
PRPF39-204ENST00000553605 MSLNQ13421 630 aaPredicted RBP13.02□□□□□ -0.33
PRPF39-204ENST00000553605 SNTB1Q13884 538 aaKnown RBP13.02□□□□□ -0.33
PRPF39-204ENST00000553605 EMC4Q5J8M3 183 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 FBXO42Q6P3S6 717 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 LANCL3Q6ZV70 420 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 RNF44Q7L0R7 432 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 POGLUT1Q8NBL1 392 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 OR10Q1Q8NGQ4 319 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 M1APQ8TC57 530 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 VAT1Q99536 393 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 MIPEPQ99797 713 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 APOL2Q9BQE5 337 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
PRPF39-204ENST00000553605 NUP62CLQ9H1M0 184 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms