RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 CCL4L1Q8NHW4 92 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 SH3KBP1Q96B97 665 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 METTL2AQ96IZ6 378 aaKnown RBP12.25□□□□□ -0.45
CACNB3-223ENST00000552480 NPAS2Q99743 824 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 THTPAQ9BU02 230 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 GSDMCQ9BYG8 508 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 SPATA6Q9NWH7 488 aaPredicted RBP12.25□□□□□ -0.45
CACNB3-223ENST00000552480 GEMIN8Q9NWZ8 242 aaKnown RBP12.25□□□□□ -0.45
CACNB3-223ENST00000552480 TAC3Q9UHF0 121 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 ICKQ9UPZ9 632 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 NDUFAF1Q9Y375 327 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 TSC22D4Q9Y3Q8 395 aa12.25□□□□□ -0.45
CACNB3-223ENST00000552480 A0A1W2PR77 199 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 PIPSLA2A3N6 862 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 DYTNA2CJ06 578 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 FAM234BA2RU67 622 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 FOXE1O00358 373 aaPredicted RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 MRASO14807 208 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 ANKRD28O15084 1053 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 MGRN1O60291 552 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 EML2O95834 649 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 G6PDP11413 515 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 PRPS2P11908 318 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 F3P13726 295 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 JAK1P23458 1154 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 ZFP36L2P47974 494 aaKnown RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 BLKP51451 505 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 POLR2JP52435 117 aaKnown RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 KCNK10P57789 538 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 UFM1P61960 85 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 PHEXP78562 749 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 RPL6Q02878 288 aaKnown RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 TBL3Q12788 808 aaKnown RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 RCAN2Q14206 197 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 KIAA0040Q15053 153 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 USP39Q53GS9 565 aaKnown RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 MAMSTRQ6ZN01 415 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 PARGQ86W56 976 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 ULK2Q8IYT8 1036 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 PHACTR4Q8IZ21 702 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 FAM9CQ8IZT9 166 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 KRT78Q8N1N4 520 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 LIX1Q8N485 282 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 C2orf73Q8N5S3 287 aaPredicted RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 MFSD2AQ8NA29 543 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 PROKR1Q8TCW9 393 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 CXorf40BQ96DE9 158 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 SPDL1Q96EA4 605 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 FCRL1Q96LA6 429 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 NRTNQ99748 197 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 PITHD1Q9GZP4 211 aaPredicted RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 XKR8Q9H6D3 395 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 SLC52A3Q9NQ40 469 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 VPS29Q9UBQ0 182 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 PRPF19Q9UMS4 504 aaKnown RBP12.24□□□□□ -0.45
CACNB3-223ENST00000552480 INVSQ9Y283 1065 aa12.24□□□□□ -0.45
CACNB3-223ENST00000552480 A0A088AWK7 358 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 A8MUI8 341 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 MAGEB17A8MXT2 336 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ANGPT2O15123 496 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 CIB2O75838 187 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 BCKDHAP12694 445 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 AMD1P17707 334 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 CAPN3P20807 821 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 CXCR2P25025 360 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 PSMB5P28074 263 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 CD38P28907 300 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 IL12AP29459 219 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 SHMT2P34897 504 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 PIK3CBP42338 1070 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 CCR8P51685 355 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 RACK1P63244 317 aaKnown RBP12.23□□□□□ -0.45
CACNB3-223ENST00000552480 REEP5Q00765 189 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 RIPK1Q13546 671 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 DDX39BQ13838 428 aaKnown RBP12.23□□□□□ -0.45
CACNB3-223ENST00000552480 WASHC2DQ5SRD0 308 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ICE2Q659A1 982 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 FAM129CQ86XR2 697 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 RNF175Q8N4F7 328 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 DEFB119Q8N690 84 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 PCYOX1LQ8NBM8 494 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ABHD11Q8NFV4 315 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 HUS1BQ8NHY5 278 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ROPN1LQ96C74 230 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 APIPQ96GX9 242 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 TEX37Q96LM6 180 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 MTERF1Q99551 399 aaKnown RBP12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ZBTB18Q99592 522 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 AIF1LQ9BQI0 150 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ACAT2Q9BWD1 397 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 TCEAL2Q9H3H9 227 aaPredicted RBP12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ACTL8Q9H568 366 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 NT5DC2Q9H857 520 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 WDR41Q9HAD4 459 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 DLGAP2Q9P1A6 1054 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ZNF624Q9P2J8 865 aaPredicted RBP12.23□□□□□ -0.45
CACNB3-223ENST00000552480 ADGRE2Q9UHX3 823 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 PRDM4Q9UKN5 801 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
CACNB3-223ENST00000552480 PCDHB11Q9Y5F2 797 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms