RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 TBC1D1Q86TI0 1168 aaPredicted RBP16.64■□□□□ 0.25
CDK4-208ENST00000551706 DNAJC22Q8N4W6 341 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 OR1L3Q8NH93 324 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 FBXL8Q96CD0 374 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 UBXN10Q96LJ8 280 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 CCNL2Q96S94 520 aaPredicted RBP16.64■□□□□ 0.25
CDK4-208ENST00000551706 PAFAH2Q99487 392 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 TXLNGYQ9BZA5 131 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 WDR70Q9NW82 654 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 ZNF180Q9UJW8 692 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 OARD1Q9Y530 152 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 AP1M2Q9Y6Q5 423 aa16.64■□□□□ 0.25
CDK4-208ENST00000551706 A0A087X1B8 175 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 EXOC1LA0A1B0GW35 172 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 OR2B3O76000 313 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 KRT38O76015 456 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 TIAF1O95411 115 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 ANXA5P08758 320 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 HBQ1P09105 142 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 CCNYL3P0C7X3 344 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 SLC35E2BP0CK96 405 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 HRH2P25021 359 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 GABRA4P48169 554 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 HNMTP50135 292 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 SERPINB8P50452 374 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 NFKB2Q00653 900 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 ABHD18Q0P651 414 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 NAE1Q13564 534 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 TSNQ15631 228 aaKnown RBP16.63■□□□□ 0.25
CDK4-208ENST00000551706 PRAMEF13Q5VWM6 474 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 FCRL6Q6DN72 434 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 CAPN13Q6MZZ7 669 aaPredicted RBP16.63■□□□□ 0.25
CDK4-208ENST00000551706 TLDC1Q6P9B6 456 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 MBOAT1Q6ZNC8 495 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 CMC1Q7Z7K0 106 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 MCATQ8IVS2 390 aaKnown RBP16.63■□□□□ 0.25
CDK4-208ENST00000551706 DPH7Q9BTV6 452 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 EFHD1Q9BUP0 239 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 SGPP1Q9BX95 441 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 SLC7A5P2Q9GIP4 190 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 ANKZF1Q9H8Y5 726 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 EURLQ9NYK6 297 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 TLK1Q9UKI8 766 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 KLHL20Q9Y2M5 609 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 ACOT9Q9Y305 439 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 NBPF19A0A087WUL8 3843 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 BSNQ9UPA5 3926 aa16.63■□□□□ 0.25
CDK4-208ENST00000551706 LRRK2Q5S007 2527 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 OR2A25A4D2G3 310 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 POC1B-GALNT4F8VUJ3 575 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 SUV39H1O43463 412 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 SRPX2O60687 465 aaPredicted RBP16.62■□□□□ 0.25
CDK4-208ENST00000551706 GUCA1CO95843 209 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 CD1DP15813 335 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 RELAQ04206 551 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 BMPR2Q13873 1038 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 CSHL1Q14406 222 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 DEFB110Q30KQ9 67 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 TCTE1Q5JU00 501 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 LGSNQ5TDP6 509 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 TIPARPQ7Z3E1 657 aaKnown RBP16.62■□□□□ 0.25
CDK4-208ENST00000551706 GSPT2Q8IYD1 628 aaKnown RBP16.62■□□□□ 0.25
CDK4-208ENST00000551706 GALNT6Q8NCL4 622 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 OR56A3Q8NH54 315 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 KIAA1143Q96AT1 154 aaPredicted RBP16.62■□□□□ 0.25
CDK4-208ENST00000551706 LRFN5Q96NI6 719 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 EGFL8Q99944 293 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 PLCD4Q9BRC7 762 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 HAUS8Q9BT25 410 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 ATG10Q9H0Y0 220 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 ACTR5Q9H9F9 607 aaPredicted RBP16.62■□□□□ 0.25
CDK4-208ENST00000551706 NMRAL1Q9HBL8 299 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 SLC6A20Q9NP91 592 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 SNX15Q9NRS6 342 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 STARD5Q9NSY2 213 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 ABCF3Q9NUQ8 709 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 IRAK4Q9NWZ3 460 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 FETUBQ9UGM5 382 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 IKZF3Q9UKT9 509 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 PADI1Q9ULC6 663 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 SNX7Q9UNH6 387 aa16.62■□□□□ 0.25
CDK4-208ENST00000551706 CCDC189A1A4V9 331 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 HMX2A2RU54 273 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 ZSCAN9O15535 394 aaPredicted RBP16.61■□□□□ 0.25
CDK4-208ENST00000551706 C2P06681 752 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 KLK3P07288 261 aaPredicted RBP16.61■□□□□ 0.25
CDK4-208ENST00000551706 LTA4HP09960 611 aaKnown RBP16.61■□□□□ 0.25
CDK4-208ENST00000551706 MYBL2P10244 700 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 EZRP15311 586 aaKnown RBP16.61■□□□□ 0.25
CDK4-208ENST00000551706 TYK2P29597 1187 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 STAT5AP42229 794 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 TGFBIQ15582 683 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 FAM83EQ2M2I3 478 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 CDKL4Q5MAI5 379 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 ZNF425Q6IV72 752 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 LCTLQ6UWM7 567 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 RNF44Q7L0R7 432 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 GPSM1Q86YR5 675 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 TCAIMQ8N3R3 496 aa16.61■□□□□ 0.25
CDK4-208ENST00000551706 UHMK1Q8TAS1 419 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms