RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 CFIP05156 583 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SLC25A36Q96CQ1 311 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 CDK15Q96Q40 435 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 METTL8Q9H825 291 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 TVP23BQ9NYZ1 205 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 ZNF8P17098 575 aaPredicted RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 PTGIRP43119 386 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 ZNF782Q6ZMW2 699 aaPredicted RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 OSTF1Q92882 214 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SLC32A1Q9H598 525 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 TRIM36Q9NQ86 728 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 FNIP2Q9P278 1114 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 TRIM64A6NGJ6 449 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 UNGP13051 313 aaPredicted RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 RABGGTBP53611 331 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 LRRC69Q6ZNQ3 347 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 PRR23BQ6ZRT6 265 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 MINDY2Q8NBR6 621 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 OR52E4Q8NGH9 312 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SHDQ96IW2 340 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 CCM2Q9BSQ5 444 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 LDAHQ9H6V9 325 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 KAT8Q9H7Z6 458 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 COQ10BQ9H8M1 238 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 DKK3Q9UBP4 350 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 POMPQ9Y244 141 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 PHRF1Q9P1Y6 1649 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 A0A1W2PRB8 838 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 OR2AT4A6NND4 320 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 ECI2O75521 394 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 HMGN1P05114 100 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 MECP2P51608 486 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 CA9Q16790 459 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 YIPF7Q8N8F6 280 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 CLEC4DQ8WXI8 215 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 KLRF1Q9NZS2 232 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 ZIM2Q9NZV7 527 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SLC2A2P11168 524 aaPredicted RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 DSTNP60981 165 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 CD47Q08722 323 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 ADAM15Q13444 863 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 COLEC12Q5KU26 742 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 P4HA3Q7Z4N8 544 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 NCSTNQ92542 709 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 NTAN1Q96AB6 310 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 POLR2J2Q9GZM3 115 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 PMF1-BGLAPU3KQ54 211 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 A0A1W2PRU2 124 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SEMA3AQ14563 771 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 PDGFRLQ15198 375 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 RUNDC3AQ59EK9 446 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SH3RF2Q8TEC5 729 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SLC22A4Q9H015 551 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 MOV10Q9HCE1 1003 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SDHAF3Q9NRP4 125 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 GRHL1Q9NZI5 618 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SCML2Q9UQR0 700 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 B4DGG1 531 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 SPATS1Q496A3 300 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 MMAAQ8IVH4 418 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 CELF5Q8N6W0 485 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 PMM1Q92871 262 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 TAMM41Q96BW9 452 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 CMTM7Q96FZ5 175 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 C12orf65Q9H3J6 166 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 GLTPD2A6NH11 291 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 CBLBQ13191 982 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 ENPP7Q6UWV6 458 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 SLC51AQ86UW1 340 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 GHDCQ8N2G8 530 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 TLCD1Q96CP7 247 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 CAPNS2Q96L46 248 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 TMLHEQ9NVH6 421 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 KLK1P06870 262 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 ZNF41P51814 821 aaPredicted RBP12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 FRG2Q64ET8 278 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 LNX2Q8N448 690 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 FRG2BQ96QU4 278 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 PTTG2Q9NZH5 202 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 CSTF2P33240 577 aaKnown RBP eCLIP12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 GDF10P55107 478 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 FAM156AQ8NDB6 213 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 OR2L8Q8NGY9 312 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 FCRL5Q96RD9 977 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 EBF3Q9H4W6 596 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 FANCFQ9NPI8 374 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 GATA5Q9BWX5 397 aaPredicted RBP12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 IGLV3-22A0A075B6J6 115 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 NIPSNAP2O75323 286 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 EIF5AP63241 154 aaKnown RBP12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 PLGLB1Q02325 96 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 ZNF676Q8N7Q3 588 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 SPIN1Q9Y657 262 aaPredicted RBP12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 SMCHD1A6NHR9 2005 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 L7N2F9 121 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 VAMP2P63027 116 aa12.19□□□□□ -0.46
RAB3IP-212ENST00000550536 PITRM1Q5JRX3 1037 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms