RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 LRCH3Q96II8 777 aa15.41■□□□□ 0.06
RBFOX1-212ENST00000550418 PKP4Q99569 1192 aa15.41■□□□□ 0.06
RBFOX1-212ENST00000550418 CA12O43570 354 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TCEA1P23193 301 aaKnown RBP15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 GMPRP36959 345 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TECRLQ5HYJ1 363 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 SIRPB2Q5JXA9 342 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 STEAP4Q687X5 459 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 HMBOX1Q6NT76 420 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 SLC30A8Q8IWU4 369 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 GHDCQ8N2G8 530 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 OXR1Q8N573 874 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 ATAD1Q8NBU5 361 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 MGME1Q9BQP7 344 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 FUZQ9BT04 418 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 FAM83DQ9H4H8 585 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 VPS29Q9UBQ0 182 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 CLCA3PQ9Y6N3 262 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 PDPK1O15530 556 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 ATG13O75143 517 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 NSG1P42857 185 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 MAP2K3P46734 347 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 HNRNPA0Q13151 305 aaKnown RBP15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 SMARCD3Q6STE5 483 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 AQP11Q8NBQ7 271 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TMEM80Q96HE8 168 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 BCL7BQ9BQE9 202 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 UCK2Q9BZX2 261 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TMEM27Q9HBJ8 222 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 CKLFQ9UBR5 152 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 FBXO9Q9UK97 447 aaPredicted RBP15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 PTPRJQ12913 1337 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TRBC2A0A5B9 178 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 ARVCFO00192 962 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 FAM171BQ6P995 826 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TMEM135Q86UB9 458 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TPT1P8Q9HAU6 139 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 STOX2Q9P2F5 926 aaPredicted RBP15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 SMIM30A4D0T7 59 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 OR6C75A6NL08 312 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 USP2O75604 605 aaPredicted RBP15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 DGKEP52429 567 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 NIPAL4Q0D2K0 466 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 UGT8Q16880 541 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 DPY19L3Q6ZPD9 716 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 ZNF367Q7RTV3 350 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TMIEQ8NEW7 156 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 C1orf216Q8TAB5 229 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 ASB12Q8WXK4 309 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 TFAP2CQ92754 450 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 CREB3L1Q96BA8 519 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 SMURF1Q9HCE7 757 aa15.4■□□□□ 0.06
RBFOX1-212ENST00000550418 A0A1W2PRB8 838 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF432O94892 652 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 CDK14O94921 469 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 H1F0P07305 194 aaKnown RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 LCN1P31025 176 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 OR4D2P58180 307 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 RPP38P78345 283 aaKnown RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 CXCL17Q6UXB2 119 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 ERVK13-1Q9NX77 482 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 MS4A12Q9NXJ0 267 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 HCN4Q9Y3Q4 1203 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 PCDHGA7Q9Y5G6 932 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 LRP6O75581 1613 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 FXYD6-FXYD2A0A087WZ82 144 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 TLX2O43763 284 aaPredicted RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 NUAK1O60285 661 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 OR10H2O60403 315 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 SERPINA3P01011 423 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC35G4P0C7Q5 338 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 NR4A2P43354 598 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 SEMA3AQ14563 771 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 TARBP2Q15633 366 aaKnown RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 C10orf62Q5T681 223 aaPredicted RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 BLOC1S3Q6QNY0 202 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 FXYD6Q9H0Q3 95 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 CD93Q9NPY3 652 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 ENAMQ9NRM1 1142 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 FKBP7Q9Y680 259 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 NT5C1B-RDH14C9J2C7 533 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 PCDH7O60245 1069 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 ACSL4O60488 711 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 PAPSS2O95340 614 aaPredicted RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 CLCNKBP51801 687 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 PIWIL3Q7Z3Z3 882 aaKnown RBP15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 FAM46DQ8NEK8 389 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 PYCR2Q96C36 320 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 MGLLQ99685 303 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC35A5Q9BS91 424 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 SLC29A3Q9BZD2 475 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 STYXL1Q9Y6J8 313 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 FAM47E-STBD1D6RA91 191 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 HMGN1P05114 100 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 CD52P31358 61 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 AP1S1P61966 158 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 ZNF33AQ06730 810 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 HSD17B12Q53GQ0 312 aa15.39■□□□□ 0.05
RBFOX1-212ENST00000550418 FRG2Q64ET8 278 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms