RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ZSCAN5DPP0CG00 497 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 NMBRP28336 390 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 GRNP28799 593 aaKnown RBP14.66□□□□□ -0.06
RAB5C-205ENST00000550013 ZNF75DP51815 510 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 NAA30Q147X3 362 aaPredicted RBP14.66□□□□□ -0.06
RAB5C-205ENST00000550013 PCID2Q5JVF3 399 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 CTSL3PQ5NE16 218 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 MCEMP1Q8IX19 187 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 RELTQ969Z4 430 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 FAM136AQ96C01 138 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 MRFAP1L1Q96HT8 127 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 DESI2Q9BSY9 194 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 YIPF2Q9BWQ6 316 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 TREX1Q9NSU2 369 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 SPATA7Q9P0W8 599 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 CAPN6Q9Y6Q1 641 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 TACC2O95359 2948 aa14.66□□□□□ -0.06
RAB5C-205ENST00000550013 ANKRD17O75179 2603 aaKnown RBP14.66□□□□□ -0.06
RAB5C-205ENST00000550013 POLQO75417 2590 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 IGHV1-45A0A0A0MS14 117 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 TRAV17A0A0B4J275 112 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 KPNA5O15131 536 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 RPS3P23396 243 aaKnown RBP eCLIP14.65□□□□□ -0.068e-7■■□□□ 11.4
RAB5C-205ENST00000550013 CXCR2P25025 360 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 ELAVL4P26378 380 aaKnown RBP14.65□□□□□ -0.06
RAB5C-205ENST00000550013 CMPK1P30085 196 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 CCNFP41002 786 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 DSG2Q14126 1118 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 HKDC1Q2TB90 917 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.65□□□□□ -0.06
RAB5C-205ENST00000550013 SUSD1Q6UWL2 747 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 GFRALQ6UXV0 394 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 LRRC6Q86X45 466 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 OTUD6BQ8N6M0 293 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 CSNK1A1LQ8N752 337 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 AMER3Q8N944 861 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 HAS2Q92819 552 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 FOPNLQ96NB1 174 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 BIRC8Q96P09 236 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 PLCD4Q9BRC7 762 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 RUVBL1Q9Y265 456 aaKnown RBP14.65□□□□□ -0.06
RAB5C-205ENST00000550013 MRPS2Q9Y399 296 aaKnown RBP14.65□□□□□ -0.06
RAB5C-205ENST00000550013 MRFAP1Q9Y605 127 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 SCN2AQ99250 2005 aa14.65□□□□□ -0.06
RAB5C-205ENST00000550013 IGKV1-8A0A0C4DH67 115 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 A0A1W2PQ72 361 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 ARHGEF33A8MVX0 844 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 NIPSNAP2O75323 286 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 WFS1O76024 890 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 BMP10O95393 424 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 MATN4O95460 622 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 WDPCPO95876 746 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 HEXBP07686 556 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 UQCRHP07919 91 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 ITGAMP11215 1152 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 POU3F2P20265 443 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-205ENST00000550013 FDXRP22570 491 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 MST1P26927 711 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 ARNTP27540 789 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 FMO4P31512 558 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 RPL22P35268 128 aaKnown RBP14.64□□□□□ -0.07
RAB5C-205ENST00000550013 EFNA3P52797 238 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 KIF5AQ12840 1032 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 TSTA3Q13630 321 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-205ENST00000550013 GBX1Q14549 363 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 INAQ16352 499 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 SYT16Q17RD7 645 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 SEL1L2Q5TEA6 688 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 CES3Q6UWW8 571 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 PAQR7Q86WK9 346 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 SLC13A5Q86YT5 568 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-205ENST00000550013 MPP5Q8N3R9 675 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 CCDC89Q8N998 374 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 ITLN2Q8WWU7 325 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-205ENST00000550013 FRMD8P1Q9BZ68 369 aaPredicted RBP14.64□□□□□ -0.07
RAB5C-205ENST00000550013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.64□□□□□ -0.07
RAB5C-205ENST00000550013 MRPS30Q9NP92 439 aaKnown RBP14.64□□□□□ -0.07
RAB5C-205ENST00000550013 RIC8BQ9NVN3 520 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 PAK5Q9P286 719 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 GALPQ9UBC7 116 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 CDC14AQ9UNH5 594 aa14.64□□□□□ -0.07
RAB5C-205ENST00000550013 CELSR1Q9NYQ6 3014 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 TRGV8A0A0C4DH27 118 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 GOLGA8KD6RF30 607 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 GOLGA8TH3BQL2 631 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 FOXS1O43638 330 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 VPS26AO75436 327 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 UNC5CO95185 931 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 ERGP11308 486 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 RPA3P35244 121 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-205ENST00000550013 SLC26A3P40879 764 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 EMP3P54852 163 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 SNRPNP63162 240 aaKnown RBP14.63□□□□□ -0.07
RAB5C-205ENST00000550013 ART3Q13508 389 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 PCOLCEQ15113 449 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 HIBCHQ6NVY1 386 aaPredicted RBP14.63□□□□□ -0.07
RAB5C-205ENST00000550013 TMEM139Q8IV31 216 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 SPNS2Q8IVW8 549 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 ARHGEF39Q8N4T4 335 aa14.63□□□□□ -0.07
RAB5C-205ENST00000550013 OR9A1PQ8NGU1 263 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms