RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 VEZF1Q14119 521 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 EFTUD2Q15029 972 aaKnown RBP eCLIP3.1□□□□□ -1.91
MRPL42-205ENST00000549561 NPTX1Q15818 432 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 C9orf152Q5JTZ5 239 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 ERMARDQ5T6L9 678 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 GPR139Q6DWJ6 353 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 SLC30A6Q6NXT4 461 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 RBPMS2Q6ZRY4 209 aaKnown RBP3.1□□□□□ -1.91
MRPL42-205ENST00000549561 PLPPR4Q7Z2D5 763 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 MAPK15Q8TD08 544 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 CENPTQ96BT3 561 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 ZNF486Q96H40 463 aaPredicted RBP3.1□□□□□ -1.91
MRPL42-205ENST00000549561 NECTIN4Q96NY8 510 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 NKX3-1Q99801 234 aaPredicted RBP3.1□□□□□ -1.91
MRPL42-205ENST00000549561 CPNE1Q99829 537 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 CCDC3Q9BQI4 270 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 DGCR6LQ9BY27 220 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 ZMYND12Q9H0C1 365 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 FAM49AQ9H0Q0 323 aaPredicted RBP3.1□□□□□ -1.91
MRPL42-205ENST00000549561 CDH20Q9HBT6 801 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 C19orf25Q9UFG5 118 aaPredicted RBP3.1□□□□□ -1.91
MRPL42-205ENST00000549561 SMAD5-AS1Q9Y6J3 95 aa3.1□□□□□ -1.91
MRPL42-205ENST00000549561 TRBV5-5A0A0J9YX44 114 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 TEX28O15482 410 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 PI15O43692 258 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 GATA1P15976 413 aaPredicted RBP3.09□□□□□ -1.91
MRPL42-205ENST00000549561 CD27P26842 260 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 HLA-FP30511 346 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 CALCOCO2Q13137 446 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 E2F5Q15329 346 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 LETM2Q2VYF4 491 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 TAF1BQ53T94 588 aaPredicted RBP3.09□□□□□ -1.91
MRPL42-205ENST00000549561 OR4A47Q6IF82 309 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 NAA16Q6N069 864 aaPredicted RBP3.09□□□□□ -1.91
MRPL42-205ENST00000549561 CENPVQ7Z7K6 275 aaPredicted RBP3.09□□□□□ -1.91
MRPL42-205ENST00000549561 IQCHQ86VS3 1027 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 CATSPERDQ86XM0 798 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 XXYLT1Q8NBI6 393 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 OR6S1Q8NH40 331 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 SPAG5Q96R06 1193 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 LPAR4Q99677 370 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 MAP3K3Q99759 626 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 UPF3AQ9H1J1 476 aaKnown RBP3.09□□□□□ -1.91
MRPL42-205ENST00000549561 CPSF3Q9UKF6 684 aaKnown RBP3.09□□□□□ -1.91
MRPL42-205ENST00000549561 KLK13Q9UKR3 277 aa3.09□□□□□ -1.91
MRPL42-205ENST00000549561 IGHV3OR16-10A0A075B7F0 116 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 CLDN4O14493 209 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 FPGTO14772 594 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 ATP6AP2O75787 350 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 CELF2O95319 508 aaKnown RBP3.08□□□□□ -1.92
MRPL42-205ENST00000549561 DNTTP04053 509 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 ZNF10P21506 573 aaPredicted RBP3.08□□□□□ -1.92
MRPL42-205ENST00000549561 PRKACGP22612 351 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 LHCGRP22888 699 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 SHC1P29353 583 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 MC5RP33032 325 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 CSE1LP55060 971 aaKnown RBP3.08□□□□□ -1.92
MRPL42-205ENST00000549561 ELAVL2Q12926 359 aaKnown RBP3.08□□□□□ -1.92
MRPL42-205ENST00000549561 RALGDSQ12967 914 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 LY6DQ14210 128 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 MTF1Q14872 753 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 FASTKD3Q14CZ7 662 aaKnown RBP3.08□□□□□ -1.92
MRPL42-205ENST00000549561 GPR33Q49SQ1 333 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 ARMC4Q5T2S8 1044 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 DET1Q7L5Y6 550 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 SPEM1Q8N4L4 309 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 TTC30BQ8N4P2 665 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 RASGEF1AQ8N9B8 481 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 TDRD5Q8NAT2 981 aaKnown RBP3.08□□□□□ -1.92
MRPL42-205ENST00000549561 SLC37A3Q8NCC5 494 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 OMA1Q96E52 524 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 LRRC61Q9BV99 259 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 SLC2A11Q9BYW1 496 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 TXLNGYQ9BZA5 131 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 MED20Q9H944 212 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 SPHK2Q9NRA0 654 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 NFKBIL1Q9UBC1 381 aaPredicted RBP3.08□□□□□ -1.92
MRPL42-205ENST00000549561 CFDP1Q9UEE9 299 aaPredicted RBP3.08□□□□□ -1.92
MRPL42-205ENST00000549561 R4GN57 208 aa3.08□□□□□ -1.92
MRPL42-205ENST00000549561 A0A087WUV0 522 aaPredicted RBP3.07□□□□□ -1.92
MRPL42-205ENST00000549561 TRAV24A0A0B4J272 114 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 A0A1W2PPR1 153 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 SNURFLB1AK76 121 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 IDH3BO43837 385 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 DKC1O60832 514 aaKnown RBP eCLIP3.07□□□□□ -1.92
MRPL42-205ENST00000549561 TADA2AO75478 443 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 CEACAM4O75871 244 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 ACSL3O95573 720 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 IGHEP01854 428 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 RBMS1P29558 406 aaKnown RBP3.07□□□□□ -1.92
MRPL42-205ENST00000549561 TLX1P31314 330 aaPredicted RBP3.07□□□□□ -1.92
MRPL42-205ENST00000549561 CAPZA2P47755 286 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 DNA2P51530 1060 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 TMEM50BP56557 158 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 KRTAP10-3P60369 221 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 IRX6P78412 446 aaPredicted RBP3.07□□□□□ -1.92
MRPL42-205ENST00000549561 MYL7Q01449 175 aa3.07□□□□□ -1.92
MRPL42-205ENST00000549561 POU5F1Q01860 360 aaKnown RBP3.07□□□□□ -1.92
MRPL42-205ENST00000549561 RBPJQ06330 500 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms