RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 IRAK1BP1Q5VVH5 260 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 LETMD1Q6P1Q0 360 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 BLOC1S3Q6QNY0 202 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 GALNT10Q86SR1 603 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 SLC38A2Q96QD8 506 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 URADA6NGE7 173 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 NME4O00746 187 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 ENO2P09104 434 aaPredicted RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 CBSLP0DN79 551 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 BMP7P18075 431 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 CBSP35520 551 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 FOXM1Q08050 763 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 GNA13Q14344 377 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 ZNHIT3Q15649 155 aaPredicted RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 CD200R1Q8TD46 325 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 SLC39A13Q96H72 371 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 ART5Q96L15 291 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 Q96MT0 163 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 IL17FQ96PD4 163 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 TEFMQ96QE5 360 aaKnown RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 PKP4Q99569 1192 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 ELOVL2Q9NXB9 296 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 ZNF282Q9UDV7 671 aaPredicted RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 PLK4O00444 970 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 GADD45GO95257 159 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 PAK4O96013 591 aaPredicted RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 ARCN1P48444 511 aaKnown RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 NUDT6P53370 316 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 SEMA3BQ13214 749 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 DCST1Q5T197 706 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 SLC22A12Q96S37 553 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 PTTG2Q9NZH5 202 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 NPIPB15A6NHN6 443 aaPredicted RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 FADS2P1A8MWK0 482 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 PSMD11O00231 422 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 NT5EP21589 574 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 RGS8P57771 180 aaPredicted RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 DSC3Q14574 896 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 SYT16Q17RD7 645 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 OTUD1Q5VV17 481 aaPredicted RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 TRIQKQ629K1 86 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 ZNF57Q68EA5 555 aaPredicted RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 TICAM1Q8IUC6 712 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 CROCCP3Q8IVE0 287 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 PGBD5Q8N414 524 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 OR52L1Q8NGH7 329 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 COL21A1Q96P44 957 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 KCNC2Q96PR1 638 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 FARSBQ9NSD9 589 aaKnown RBP15.82■□□□□ 0.12
CUX1-213ENST00000549414 N6AMT1Q9Y5N5 214 aa15.82■□□□□ 0.12
CUX1-213ENST00000549414 MYO10Q9HD67 2058 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 PDPK1O15530 556 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 PTPN5P54829 565 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 GRSF1Q12849 480 aaKnown RBP eCLIP15.81■□□□□ 0.12
CUX1-213ENST00000549414 TEAD4Q15561 434 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 SNAPC1Q16533 368 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 RFTN2Q52LD8 501 aaPredicted RBP15.81■□□□□ 0.12
CUX1-213ENST00000549414 NOXRED1Q6NXP6 359 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 TRAF7Q6Q0C0 670 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 ZNF783Q6ZMS7 281 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 ZNF730Q6ZMV8 503 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.81■□□□□ 0.12
CUX1-213ENST00000549414 RTN4RL1Q86UN2 441 aaPredicted RBP15.81■□□□□ 0.12
CUX1-213ENST00000549414 GALNT15Q8N3T1 639 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 RAD9AQ99638 391 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 MRPS7Q9Y2R9 242 aaKnown RBP15.81■□□□□ 0.12
CUX1-213ENST00000549414 DRGXA6NNA5 263 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 SRCP12931 536 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 FUT4P22083 530 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 ATP4BP51164 291 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 CLCN4P51793 760 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 CSNK2BP67870 215 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 FAM189BP81408 668 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 SCARB2Q14108 478 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 DUOXA1Q1HG43 343 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 FBXO46Q6PJ61 603 aaPredicted RBP15.81■□□□□ 0.12
CUX1-213ENST00000549414 CRTC1Q6UUV9 634 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 PRSS58Q8IYP2 241 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 GLYATL1Q969I3 302 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 RELTQ969Z4 430 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 PALMDQ9NP74 551 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 MCM3APO60318 1980 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 TMEM189-UBE2V1I3L0A0 370 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 HOXD8P13378 290 aaPredicted RBP15.81■□□□□ 0.12
CUX1-213ENST00000549414 TM4SF4P48230 202 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 SEPHS1P49903 392 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 DSC1Q08554 894 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 LRRC32Q14392 662 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 MEP1AQ16819 746 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 OR2T5Q6IEZ7 315 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 DENND5AQ6IQ26 1287 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 TMIGD1Q6UXZ0 262 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 KBTBD8Q8NFY9 601 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 OR2T29Q8NH02 315 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 POP5Q969H6 163 aaKnown RBP15.81■□□□□ 0.12
CUX1-213ENST00000549414 ZNF641Q96N77 438 aaPredicted RBP15.81■□□□□ 0.12
CUX1-213ENST00000549414 CD320Q9NPF0 282 aa15.81■□□□□ 0.12
CUX1-213ENST00000549414 PRR23D1E9PI22 279 aaPredicted RBP15.8■□□□□ 0.12
CUX1-213ENST00000549414 PRR23D2P0DMB1 279 aaPredicted RBP15.8■□□□□ 0.12
CUX1-213ENST00000549414 RPL4P36578 427 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms