RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 LYSMD1Q96S90 227 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 CEP44Q9C0F1 390 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 TBC1D14Q9P2M4 693 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 CKAP5Q14008 2032 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 TRIM64CA6NLI5 447 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 CLDN25C9JDP6 229 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 SULT1C4O75897 302 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 SEC14L2O76054 403 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 EPCAMP16422 314 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 HLA-FP30511 346 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 IDH2P48735 452 aaKnown RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 TPTEP56180 551 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 NFKB2Q00653 900 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 DBPQ10586 325 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 GTF2H2Q13888 395 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 CRY1Q16526 586 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 PDCD4Q53EL6 469 aaKnown RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 DGKKQ5KSL6 1271 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 IER5LQ5T953 404 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 GTF2H2CQ6P1K8 395 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 GOLGA7Q7Z5G4 137 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 CADM3Q8N126 398 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 EID2BQ96D98 161 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ECHDC3Q96DC8 303 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ACAT2Q9BWD1 397 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 TMEM121BQ9BXQ6 578 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 LOC100130705A0A1B0GUX0 176 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 FAM234BA2RU67 622 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 TMEM221A6NGB7 291 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 A6NL46 340 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 NDUFS2O75306 463 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 ENO2P09104 434 aaPredicted RBP10.77□□□□□ -0.69
LINC00661-204ENST00000549354 SRCP12931 536 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 OR1E2P47887 323 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 EEFSECP57772 596 aaKnown RBP10.77□□□□□ -0.69
LINC00661-204ENST00000549354 EMX1Q04741 257 aaPredicted RBP10.77□□□□□ -0.69
LINC00661-204ENST00000549354 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
LINC00661-204ENST00000549354 TMEM25Q86YD3 366 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 UBE2J2Q8N2K1 259 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 RHEBL1Q8TAI7 183 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 BPIFB1Q8TDL5 484 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 CHPT1Q8WUD6 406 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 SELENOMQ8WWX9 145 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 MBOAT4Q96T53 435 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 DOK1Q99704 481 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 CPEB1Q9BZB8 566 aaKnown RBP10.77□□□□□ -0.69
LINC00661-204ENST00000549354 MCOLN1Q9GZU1 580 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 DPP7Q9UHL4 492 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 SNX8Q9Y5X2 465 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 SLC1A7O00341 560 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 FFAR2O15552 330 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 ULK1O75385 1050 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 GSTT2P0CG29 244 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 GSTT2BP0CG30 244 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 TMBIM6P55061 237 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 GP2P55259 537 aaKnown RBP10.77□□□□□ -0.69
LINC00661-204ENST00000549354 LRRC74AQ0VAA2 488 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 EPS8Q12929 822 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 ABRQ12979 859 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 ADPRMQ3LIE5 342 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 CTSL3PQ5NE16 218 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 OR4F3Q6IEY1 312 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 KLHL17Q6TDP4 642 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 AHSA2Q719I0 299 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 SPATA19Q7Z5L4 167 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 SPRED2Q7Z698 418 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 ZFAND4Q86XD8 727 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 OR2AP1Q8NGE2 309 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 NETO1Q8TDF5 533 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 IRF7Q92985 503 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 POU2F3Q9UKI9 436 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 GBF1Q92538 1859 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 SCN8AQ9UQD0 1980 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 CCDC88CQ9P219 2028 aa10.77□□□□□ -0.69
LINC00661-204ENST00000549354 C16orf96A6NNT2 1141 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 ZNF701M0R085 212 aaPredicted RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 E2F3O00716 465 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 ANGPTL1O95841 491 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 IGSF6O95976 241 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 TRBC1P01850 177 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 RPS17P08708 135 aaKnown RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 HTR1EP28566 365 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 TTPAP49638 278 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 DAB2P98082 770 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 GTF2IRD2BQ6EKJ0 949 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 TMEM53Q6P2H8 277 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 DOK6Q6PKX4 331 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SLC16A12Q6ZSM3 486 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 GTF2IRD2Q86UP8 949 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SLC22A16Q86VW1 577 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 PTRH1Q86Y79 214 aaKnown RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 RIMKLAQ8IXN7 391 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 PDPRQ8NCN5 879 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 UTP15Q8TED0 518 aaKnown RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 TRUB1Q8WWH5 349 aaKnown RBP10.76□□□□□ -0.69
LINC00661-204ENST00000549354 RORBQ92753 470 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 SCAMP4Q969E2 229 aa10.76□□□□□ -0.69
LINC00661-204ENST00000549354 ASB2Q96Q27 587 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms