RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 C3orf62Q6ZUJ4 267 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 PRICKLE2Q7Z3G6 844 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 VN1R5Q7Z5H4 357 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 BVESQ8NE79 360 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 JADE3Q92613 823 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ERLEC1Q96DZ1 483 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CMTM5Q96DZ9 223 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 MRGPRX1Q96LB2 322 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 MESP1Q9BRJ9 268 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ZBTB26Q9HCK0 441 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 MRPS18AQ9NVS2 196 aaKnown RBP4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF225Q9UK10 706 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 POMT2Q9UKY4 750 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CLEC4EQ9ULY5 219 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF148Q9UQR1 794 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 CRYL1Q9Y2S2 319 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 MMACHCQ9Y4U1 282 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 HSPE1-MOB4S4R3N1 261 aa4.72□□□□□ -1.65
SCAF11-212ENST00000549162 LOC102725191A0A1B0GVB3 256 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 A8MT66 165 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 TRIM13O60858 407 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 TPPPO94811 219 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 IGHMP01871 453 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 CLPSP04118 112 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 ALPIP09923 528 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 OR56A5P0C7T3 313 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 SPATA31D3P0C874 917 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 MTHFD1P11586 935 aaKnown RBP4.71□□□□□ -1.65
SCAF11-212ENST00000549162 ENDOUP21128 410 aaKnown RBP4.71□□□□□ -1.65
SCAF11-212ENST00000549162 MSX1P28360 303 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 CD6P30203 668 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 SHMT2P34897 504 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 GMPRP36959 345 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 CLDN8P56748 225 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 PCBP3P57721 371 aaKnown RBP4.71□□□□□ -1.65
SCAF11-212ENST00000549162 OSTNP61366 133 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 E2F1Q01094 437 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 MERTKQ12866 999 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 INAQ16352 499 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 FAM83EQ2M2I3 478 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 TXNDC8Q6A555 127 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 PARM1Q6UWI2 310 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 SPATA31D4Q6ZUB0 917 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 PRUNE1Q86TP1 453 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 C10orf67Q8IYJ2 551 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 EID3Q8N140 333 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 SFRP1Q8N474 314 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 BMPERQ8N8U9 685 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 DCBLD1Q8N8Z6 715 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 PLPP5Q8NEB5 264 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF548Q8NEK5 533 aaPredicted RBP4.71□□□□□ -1.65
SCAF11-212ENST00000549162 FGF14Q92915 247 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 BMFQ96LC9 184 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 NSRP1Q9H0G5 558 aaKnown RBP4.71□□□□□ -1.65
SCAF11-212ENST00000549162 RABEP2Q9H5N1 569 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 RNF122Q9H9V4 155 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 FBXO8Q9NRD0 319 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 THEGQ9P2T0 379 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 COQ6Q9Y2Z9 468 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM184BQ9Y519 407 aaPredicted RBP4.71□□□□□ -1.65
SCAF11-212ENST00000549162 CLDN16Q9Y5I7 305 aa4.71□□□□□ -1.65
SCAF11-212ENST00000549162 FAM95CA0A1B0GW59 222 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 A0A1B0GWJ7 208 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 TCRBV5S2A0A599 114 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 NPIPB9F8W1W9 429 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 J3QW42 95 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 SGK1O00141 431 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 MSI1O43347 362 aaKnown RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 ULK1O75385 1050 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 DNAJB5O75953 348 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 TRHRP34981 398 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 AVPR1AP37288 418 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 EFNB1P98172 346 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 GUCY1A3Q02108 690 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 DMTNQ08495 405 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 EIF2B5Q13144 721 aaKnown RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 MAPRE2Q15555 327 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 FNDC7Q5VTL7 733 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 DHRS4L2Q6PKH6 230 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 LINC00114Q6XXX2 140 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 OR52K1Q8NGK4 314 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 AP2M1Q96CW1 435 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 TOE1Q96GM8 510 aaKnown RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 C10orf90Q96M02 699 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 SIGLEC11Q96RL6 698 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 STACQ99469 402 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 DUSP23Q9BVJ7 150 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 YTHDF1Q9BYJ9 559 aaKnown RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 POLMQ9NP87 494 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 TRMT1Q9NXH9 659 aaKnown RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 BPTFQ12830 3046 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 SDHDO14521 159 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 DLGAP3O95886 979 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 AK1P00568 194 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 IGHEP01854 428 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 STMN1P16949 149 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 GPX2P18283 190 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 SDHBP21912 280 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 ARRB2P32121 409 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 BNC1Q01954 994 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms