RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SELENBP1Q13228 472 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 MTA1Q13330 715 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 SOWAHCQ53LP3 525 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZNF362Q5T0B9 420 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 PRAMEF9Q5VWM5 478 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 PRSS48Q7RTY5 328 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 TSPYL5Q86VY4 417 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 PTOV1Q86YD1 416 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 ENTHD1Q8IYW4 607 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 SVOPQ8N4V2 548 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 RHOXF1Q8NHV9 184 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 KCNC2Q96PR1 638 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 TTLL2Q9BWV7 592 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 POU2F3Q9UKI9 436 aa13.72□□□□□ -0.21
RAPGEF3-218ENST00000548919 YY2O15391 372 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 SH3BGRLO75368 114 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 GRK3P35626 688 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 CLK1P49759 484 aaKnown RBP13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 KCNJ8Q15842 424 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 MFSD14CQ5VZR4 134 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 NEK5Q6P3R8 708 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 RFLNAQ6ZTI6 216 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 SERPINA11Q86U17 422 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 MINDY2Q8NBR6 621 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 DNAJB8Q8NHS0 232 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 BCL7CQ8WUZ0 217 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 C6orf62Q9GZU0 229 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 RNF167Q9H6Y7 350 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 TBX1O43435 398 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 TRBC1P01850 177 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 SEMG1P04279 462 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 CCR7P32248 378 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 EIF2DP41214 584 aaKnown RBP13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 HSPA14Q0VDF9 509 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 NOXRED1Q6NXP6 359 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 TRAF7Q6Q0C0 670 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 MACC1Q6ZN28 852 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 RNF165Q6ZSG1 346 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 ZSWIM9Q86XI8 627 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 APCDD1Q8J025 514 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 NELL1Q92832 810 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 MAL2Q969L2 176 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 TESCQ96BS2 214 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 CWH43Q9H720 699 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 REEP1Q9H902 201 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 ERVW-1Q9UQF0 538 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 SLC22A14Q9Y267 594 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 HSPE1-MOB4S4R3N1 261 aa13.71□□□□□ -0.21
RAPGEF3-218ENST00000548919 KCNE1BA0A087WTH5 132 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 DBTP11182 482 aaKnown RBP13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 PRPS2P11908 318 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 PPP5CP53041 499 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 CASP9P55211 416 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 CAMK2GQ13555 558 aaPredicted RBP13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 UGT8Q16880 541 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 DUOXA1Q1HG43 343 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 PROX2Q3B8N5 592 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 PTCHD3Q3KNS1 767 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 CST9Q5W186 159 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 LINC00299Q6ZSB3 139 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 UBE2R2Q712K3 238 aaPredicted RBP13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 LYSMD2Q8IV50 215 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 VRK3Q8IV63 474 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 SLC7A5P1Q8MH63 180 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 NXPE1Q8N323 547 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 GPR26Q8NDV2 337 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 FAM83FQ8NEG4 500 aaPredicted RBP13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 PLD4Q96BZ4 506 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 ATG10Q9H0Y0 220 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 NMRK2Q9NPI5 230 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 TMEM184CQ9NVA4 438 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 ANKMY1Q9P2S6 941 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 SNX6Q9UNH7 406 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 ZNF232Q9UNY5 417 aa13.71□□□□□ -0.22
RAPGEF3-218ENST00000548919 TRBV5-4A0A0C4DH59 114 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 AIREO43918 545 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 OXSR1O95747 527 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 AMD1P17707 334 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 GADD45AP24522 165 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 ZNF157P51786 506 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 NUDT6P53370 316 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 CRYBA2P53672 197 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 FOXD4Q12950 439 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 CDKN3Q16667 212 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 PLEKHG6Q3KR16 790 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 TTLL9Q3SXZ7 439 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 INO80DQ53TQ3 878 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 CCSAPQ6IQ19 270 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 ARMC8Q8IUR7 673 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 FBXO22Q8NEZ5 403 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 COPS4Q9BT78 406 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 BBS2Q9BXC9 721 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 ITPAQ9BY32 194 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 RDH14Q9HBH5 336 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 ITM2CQ9NQX7 267 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 RNF6Q9Y252 685 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms