RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 ANKRD12Q6UB98 2062 aa10.89□□□□□ -0.67
BEST3-209ENST00000548658 MED13Q9UHV7 2174 aa10.89□□□□□ -0.67
BEST3-209ENST00000548658 PABPN1LA6NDY0 278 aaKnown RBP10.88□□□□□ -0.67
BEST3-209ENST00000548658 SLC16A5O15375 505 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 HIST1H2AGP0C0S8 130 aaPredicted RBP10.88□□□□□ -0.67
BEST3-209ENST00000548658 HIST1H2ADP20671 130 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CCND1P24385 295 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 MCM3P25205 808 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 IVDP26440 423 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CD97P48960 835 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CARSP49589 748 aaKnown RBP10.88□□□□□ -0.67
BEST3-209ENST00000548658 MPP1Q00013 466 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 AIMP2Q13155 320 aaKnown RBP10.88□□□□□ -0.67
BEST3-209ENST00000548658 SP140Q13342 867 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CUL1Q13616 776 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 MYBPC3Q14896 1274 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 BBS9Q3SYG4 887 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 VWA5B1Q5TIE3 1220 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 IRAK1BP1Q5VVH5 260 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 GARNL3Q5VVW2 1013 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 FRMPD2BQ6IN97 320 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 UBE2R2Q712K3 238 aaPredicted RBP10.88□□□□□ -0.67
BEST3-209ENST00000548658 CREG2Q8IUH2 290 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 KLHL7Q8IXQ5 586 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CPNE9Q8IYJ1 553 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 GALNT16Q8N428 558 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 GIMAP7Q8NHV1 300 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CERS2Q96G23 380 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 PDLIM2Q96JY6 352 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 HIST1H2AHQ96KK5 128 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CAPZA3Q96KX2 299 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 HIST1H2AJQ99878 128 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 H2AFJQ9BTM1 129 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 NUDT9Q9BW91 350 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 FAM129AQ9BZQ8 928 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 SLAMF7Q9NQ25 335 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 SLC22A11Q9NSA0 550 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 TAC3Q9UHF0 121 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CDC23Q9UJX2 597 aa10.88□□□□□ -0.67
BEST3-209ENST00000548658 CORO1CQ9ULV4 474 aaPredicted RBP10.88□□□□□ -0.67
BEST3-209ENST00000548658 LOC105369274A0A096LPK9 316 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 LOC102723532A0A0G2JNH3 316 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 KRT87PA6NCN2 255 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 VSTM2BA6NLU5 285 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 H0YGG7 62 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 PCDH17O14917 1159 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 CNOT3O75175 753 aaKnown RBP10.87□□□□□ -0.67
BEST3-209ENST00000548658 VPS4BO75351 444 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 AHSGP02765 367 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 UMODP07911 640 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 OR1D4P47884 311 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 MLLT10P55197 1068 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 ARL4CP56559 192 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 IL2P60568 153 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 ARF3P61204 181 aaPredicted RBP10.87□□□□□ -0.67
BEST3-209ENST00000548658 ILF2Q12905 390 aaKnown RBP10.87□□□□□ -0.67
BEST3-209ENST00000548658 IGFBP7Q16270 282 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 HIF1AQ16665 826 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 PRTGQ2VWP7 1150 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 ZNF425Q6IV72 752 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 JMJD6Q6NYC1 403 aaPredicted RBP10.87□□□□□ -0.67
BEST3-209ENST00000548658 IGFL3Q6UXB1 125 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 PPP1R32Q7Z5V6 425 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 ADCK2Q7Z695 626 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 PAQR7Q86WK9 346 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 OR4N4Q8N0Y3 316 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 MYO1HQ8N1T3 1032 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 CSNK1A1LQ8N752 337 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 BBOF1Q8ND07 529 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 PNPLA2Q96AD5 504 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 MIB2Q96AX9 1013 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 SNF8Q96H20 258 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 CABS1Q96KC9 395 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 OR2A5Q96R48 311 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 SPSB2Q99619 263 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 TRIM54Q9BYV2 358 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 PARVBQ9HBI1 364 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 SLC6A20Q9NP91 592 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 CCDC177Q9NQR7 707 aaPredicted RBP10.87□□□□□ -0.67
BEST3-209ENST00000548658 TMEM184CQ9NVA4 438 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 VPS4AQ9UN37 437 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 FER1L5A0AVI2 2057 aa10.87□□□□□ -0.67
BEST3-209ENST00000548658 CCDC88CQ9P219 2028 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 USP27XA6NNY8 438 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 IMPA1P29218 277 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 ELK3P41970 407 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 FAM53BQ14153 422 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 FRG1Q14331 258 aaKnown RBP10.86□□□□□ -0.67
BEST3-209ENST00000548658 RBBP7Q16576 425 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 NDUFA9Q16795 377 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 NADK2Q4G0N4 442 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 MSS51Q4VC12 460 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 TEDDM1Q5T9Z0 273 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 PRAMEF13Q5VWM6 474 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 HIBCHQ6NVY1 386 aaPredicted RBP10.86□□□□□ -0.67
BEST3-209ENST00000548658 PAQR3Q6TCH7 311 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 COX15Q7KZN9 410 aa10.86□□□□□ -0.67
BEST3-209ENST00000548658 PIWIL4Q7Z3Z4 852 aaKnown RBP10.86□□□□□ -0.67
BEST3-209ENST00000548658 LRRC56Q8IYG6 542 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms