RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 C4orf46Q504U0 113 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 TCEAL5Q5H9L2 206 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 CHFRQ96EP1 664 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 ZSWIM3Q96MP5 696 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 PFDN5Q99471 154 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 LGR4Q9BXB1 951 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 FXYD6Q9H0Q3 95 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 TAS2R3Q9NYW6 316 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 TNFRSF10DQ9UBN6 386 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 DUOX1Q9NRD9 1551 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF536O15090 1300 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 H3BM21 787 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 PCDHGA12O60330 932 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-212ENST00000546744 ELK4P28324 431 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 ST3GAL4Q11206 333 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 KCNJ8Q15842 424 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 SPIN4Q56A73 249 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 TIGD4Q8IY51 512 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 Q8N402 240 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 OR8J1Q8NGP2 316 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 FAM129BQ96TA1 746 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 TM9SF2Q99805 663 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 WACQ9BTA9 647 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 YIPF2Q9BWQ6 316 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 MROQ9BYG7 248 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 TMEM168Q9H0V1 697 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 KCNH6Q9H252 994 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 RNF121Q9H920 327 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 NDUFAF4Q9P032 175 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 GTF2IRD1Q9UHL9 959 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 TRAPPC2P0DI81 140 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 TRAPPC2BP0DI82 140 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 SAGP10523 405 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-212ENST00000546744 IL1R2P27930 398 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 CNTN2Q02246 1040 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 RPL6Q02878 288 aaKnown RBP12.48□□□□□ -0.41
PTCH1-212ENST00000546744 CHIT1Q13231 466 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 SCARB2Q14108 478 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 SEC23BQ15437 767 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 UGCGQ16739 394 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 PLA2G4EQ3MJ16 856 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 ASB18Q6ZVZ8 466 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 XAGE5Q8WWM1 108 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF382Q96SR6 550 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 FTHL17Q9BXU8 183 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 OXCT2Q9BYC2 517 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-212ENST00000546744 PCBD2Q9H0N5 130 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 MTG2Q9H4K7 406 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 MALT1Q9UDY8 824 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 EDARQ9UNE0 448 aa12.48□□□□□ -0.41
PTCH1-212ENST00000546744 A0A1B0GVC2 190 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 DUXAA6NLW8 204 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 AQP9O43315 295 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 URODP06132 367 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 PVALBP20472 110 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 GTF2A2P52657 109 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 PLA2G16P53816 162 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 KEAP1Q14145 624 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 NCBP2-AS2Q69YL0 99 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 RAVER1Q8IY67 606 aaKnown RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 KIAA0319LQ8IZA0 1049 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 PSD4Q8NDX1 1056 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 OR5J2Q8NH18 312 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 SLC39A3Q9BRY0 314 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 EFCAB11Q9BUY7 163 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 SPG21Q9NZD8 308 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 ZNF510Q9Y2H8 683 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 PCDHB9Q9Y5E1 797 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 COL24A1Q17RW2 1714 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 PRSS51A0A1B0GVH4 220 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 OR6C75A6NL08 312 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 WRBO00258 174 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 FFAR2O15552 330 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 RFPL3O75679 317 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 EBLN1P0CF75 366 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 UGT2B10P36537 528 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 NSG1P42857 185 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 SSR2P43308 183 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 CREMQ03060 361 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 SIX1Q15475 284 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 LY6KQ17RY6 165 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 FAM198BQ6UWH4 519 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 LACC1Q8IV20 430 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 GLIS1Q8NBF1 620 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 RHOXF1Q8NHV9 184 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 DDX1Q92499 740 aaKnown RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 AZIN2Q96A70 460 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 C7orf50Q9BRJ6 194 aaKnown RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 TTLL2Q9BWV7 592 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 CAPN10Q9HC96 672 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 SCP2D1Q9UJQ7 156 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 TIMM13Q9Y5L4 95 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-212ENST00000546744 A0A096LPI6 279 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 AGAP5A6NIR3 686 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 IRF6O14896 467 aa12.47□□□□□ -0.41
PTCH1-212ENST00000546744 AHSGP02765 367 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms