RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 IFFO1Q0D2I5 559 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 CLN3Q13286 438 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 ACAP2Q15057 778 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 PTCHD3Q3KNS1 767 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 CDKL4Q5MAI5 379 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 SULT1C3Q6IMI6 304 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 LCTLQ6UWM7 567 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 THOC6Q86W42 341 aaKnown RBP16.14■□□□□ 0.17
LTBR-215ENST00000546296 PAQR7Q86WK9 346 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 NLGN4XQ8N0W4 816 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 IL22RA1Q8N6P7 574 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 NLGN4YQ8NFZ3 816 aaPredicted RBP16.14■□□□□ 0.17
LTBR-215ENST00000546296 ISL2Q96A47 359 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 RHBDF1Q96CC6 855 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 CLIP3Q96DZ5 547 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 CABS1Q96KC9 395 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 SCYL1Q96KG9 808 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 PRAP1Q96NZ9 151 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 SPRY4Q9C004 299 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 CNOT10Q9H9A5 744 aaKnown RBP16.14■□□□□ 0.17
LTBR-215ENST00000546296 TMEM184CQ9NVA4 438 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 CUEDC1Q9NWM3 386 aaPredicted RBP16.14■□□□□ 0.17
LTBR-215ENST00000546296 WWOXQ9NZC7 414 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 RAB21Q9UL25 225 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 TMEM184BQ9Y519 407 aaPredicted RBP16.14■□□□□ 0.17
LTBR-215ENST00000546296 IGKV1-8A0A0C4DH67 115 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 TEX51A0A1B0GUA7 166 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 CCDC189A1A4V9 331 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 OR2A25A4D2G3 310 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 CTSVO60911 334 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 KERAO60938 352 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 CPNE3O75131 537 aaKnown RBP16.13■□□□□ 0.17
LTBR-215ENST00000546296 WDR47O94967 919 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 MT-ND3P03897 115 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 EIF2S1P05198 315 aaKnown RBP16.13■□□□□ 0.17
LTBR-215ENST00000546296 COL6A2P12110 1019 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 CDH1P12830 882 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 MAGEA12P43365 314 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 GABRA4P48169 554 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 VSX2P58304 361 aaPredicted RBP16.13■□□□□ 0.17
LTBR-215ENST00000546296 ZXDCQ2QGD7 858 aaPredicted RBP16.13■□□□□ 0.17
LTBR-215ENST00000546296 C18orf21Q32NC0 220 aaPredicted RBP16.13■□□□□ 0.17
LTBR-215ENST00000546296 MANEAQ5SRI9 462 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 PRAMEF17Q5VTA0 474 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 ZNF425Q6IV72 752 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 FBXO42Q6P3S6 717 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 TIFABQ6ZNK6 161 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 TIPARPQ7Z3E1 657 aaKnown RBP16.13■□□□□ 0.17
LTBR-215ENST00000546296 DTX1Q86Y01 620 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 SPACA3Q8IXA5 215 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 ESX1Q8N693 406 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 ZNF655Q8N720 491 aaPredicted RBP16.13■□□□□ 0.17
LTBR-215ENST00000546296 RHEBL1Q8TAI7 183 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 NKD1Q969G9 470 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 ZFYVE21Q9BQ24 234 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 ACTR5Q9H9F9 607 aaPredicted RBP16.13■□□□□ 0.17
LTBR-215ENST00000546296 NUDT4Q9NZJ9 180 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 SLC22A14Q9Y267 594 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 PCDHB3Q9Y5E6 796 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 AP1M2Q9Y6Q5 423 aa16.13■□□□□ 0.17
LTBR-215ENST00000546296 DMXL2Q8TDJ6 3036 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 A0A087WV48 116 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 TLDC2A0PJX2 215 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 UBXN8O00124 270 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 ZSCAN9O15535 394 aaPredicted RBP16.12■□□□□ 0.17
LTBR-215ENST00000546296 ZNF749O43361 778 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 NRP2O60462 931 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 SRPX2O60687 465 aaPredicted RBP16.12■□□□□ 0.17
LTBR-215ENST00000546296 RFPL1O75677 317 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 DLGAP3O95886 979 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 CTSBP07858 339 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 HBQ1P09105 142 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 RBP1P09455 135 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 EZRP15311 586 aaKnown RBP16.12■□□□□ 0.17
LTBR-215ENST00000546296 GDF5P43026 501 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 CCR8P51685 355 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 MAP7Q14244 749 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 TSNAXIP1Q2TAA8 658 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 TCTE1Q5JU00 501 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 TLDC1Q6P9B6 456 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 PLD6Q8N2A8 252 aaKnown RBP16.12■□□□□ 0.17
LTBR-215ENST00000546296 EPS8L3Q8TE67 593 aaKnown RBP16.12■□□□□ 0.17
LTBR-215ENST00000546296 HNRNPLLQ8WVV9 542 aaKnown RBP16.12■□□□□ 0.17
LTBR-215ENST00000546296 RERGQ96A58 199 aaPredicted RBP16.12■□□□□ 0.17
LTBR-215ENST00000546296 KIAA1143Q96AT1 154 aaPredicted RBP16.12■□□□□ 0.17
LTBR-215ENST00000546296 OR4K3Q96R72 315 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 ATOH8Q96SQ7 321 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 NDC1Q9BTX1 674 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 PCMTD2Q9NV79 361 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 PADI1Q9ULC6 663 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 SH2B3Q9UQQ2 575 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 KCNE2Q9Y6J6 123 aa16.12■□□□□ 0.17
LTBR-215ENST00000546296 WDFY3Q8IZQ1 3526 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 APC2O95996 2303 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 HAT1O14929 419 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 TAPBPO15533 448 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 STK16O75716 305 aa16.11■□□□□ 0.17
LTBR-215ENST00000546296 IPO13O94829 963 aaKnown RBP16.11■□□□□ 0.17
LTBR-215ENST00000546296 KLK3P07288 261 aaPredicted RBP16.11■□□□□ 0.17
LTBR-215ENST00000546296 GFAPP14136 432 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms