RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 C1GALT1Q9NS00 363 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 FAM86C1Q9NVL1 165 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 SEMA5BQ9P283 1151 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 ASB1Q9Y576 335 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 PCDHGA11Q9Y5H2 935 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 U3KQA8 63 aa15.44■□□□□ 0.06
PRPF40A-212ENST00000545856 A0A0J9YY10 115 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 SERTM1A2A2V5 107 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 TLCD2A6NGC4 264 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 TCP11X1B4DZS4 312 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 H0YIV9 168 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 OR7A17O14581 309 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 AZIN1O14977 448 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 MAP3K7O43318 606 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 C1GALT1C1LP0DN25 315 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 JUPP14923 745 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 UGT2B7P16662 529 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 EPORP19235 508 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 GNGT1P63211 74 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 SF1Q15637 639 aaKnown RBP15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 GRHL2Q6ISB3 625 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 SUSD1Q6UWL2 747 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 SLCO4C1Q6ZQN7 724 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 LRRC34Q8IZ02 419 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 LSMEM2Q8N112 164 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 PPFIBP2Q8ND30 876 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 OR2I1PQ8NGU4 316 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 FLVCR1-AS1Q8TAF5 88 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 NEIL2Q969S2 332 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 ESAMQ96AP7 390 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 CCDC74AQ96AQ1 378 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 THAP11Q96EK4 314 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 CNDP2Q96KP4 475 aaKnown RBP15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 OR2A14Q96R47 310 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 SORT1Q99523 831 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 TBC1D10AQ9BXI6 508 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 XKR8Q9H6D3 395 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 PSD3Q9NYI0 1048 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 SNX6Q9UNH7 406 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 PCDHGA1Q9Y5H4 931 aa15.43■□□□□ 0.06
PRPF40A-212ENST00000545856 MDC1Q14676 2089 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 PCNX2A6NKB5 2137 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 DNAH14Q0VDD8 3507 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 PRAMEF33A0A0G2JMD5 474 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 GSAPA4D1B5 854 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 GMNCA6NCL1 334 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 CPNE6O95741 557 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 KRT6AP02538 564 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 C9P02748 559 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 KRT6BP04259 564 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 TROVE2P10155 538 aaKnown RBP eCLIP15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 HSD3B1P14060 373 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 HGFP14210 728 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 EZRP15311 586 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 PCSK2P16519 638 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 HSD3B2P26439 372 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 PRDX3P30048 256 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 PEBP1P30086 187 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 KRT6CP48668 564 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 CDH13P55290 713 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 SH3BP2P78314 561 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 PHEXP78562 749 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 NHLH1Q02575 133 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 CHIT1Q13231 466 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 C18orf21Q32NC0 220 aaPredicted RBP15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 XKR6Q5GH73 641 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 ZNF425Q6IV72 752 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 GLRX5Q86SX6 157 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 SFTPA2Q8IWL1 248 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 OR52B6Q8NGF0 335 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 RSC1A1Q92681 617 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 METTL2AQ96IZ6 378 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 NSUN5Q96P11 429 aaKnown RBP15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 SEMA6CQ9H3T2 930 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 CAAP1Q9H8G2 361 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 PDP2Q9P2J9 529 aa15.42■□□□□ 0.06
PRPF40A-212ENST00000545856 KRT87PA6NCN2 255 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 LRRC14BA6NHZ5 514 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 TRPC5OSA6NMA1 111 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 E7EQ34 232 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 CBFA2T3O75081 653 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 CRCPO75575 148 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 VIMP08670 466 aaKnown RBP15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 ANKRD34CP0C6C1 535 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 MSL3P1P0C860 447 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 POLR2CP19387 275 aaPredicted RBP15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 REEP5Q00765 189 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 TSTA3Q13630 321 aaPredicted RBP15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 KANK2Q63ZY3 851 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 PRSS42Q7Z5A4 293 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 TMPRSS11BQ86T26 416 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 FAM129CQ86XR2 697 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 LAS2Q8IYD9 372 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 OR4F6Q8NGB9 312 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 IFI44Q8TCB0 444 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 SPHK1Q9NYA1 384 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 CIDEBQ9UHD4 219 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 TRAF6Q9Y4K3 522 aa15.41■□□□□ 0.06
PRPF40A-212ENST00000545856 KCNE1BA0A087WTH5 132 aa15.4■□□□□ 0.06
PRPF40A-212ENST00000545856 TRBC2A0A5B9 178 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms